RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 OSBPP22059 807 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 ARHGAP45Q92619 1136 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
HDAC1-202ENST00000428704 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 VEZTQ9HBM0 779 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 MYPNQ86TC9 1320 aa10.78□□□□□ -0.68
HDAC1-202ENST00000428704 MED23Q9ULK4 1368 aa10.77□□□□□ -0.68
HDAC1-202ENST00000428704 CLRN2A0PK11 232 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 CSF1RP07333 972 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 FOXO4P98177 505 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 DZIP1LQ8IYY4 767 aaKnown RBP10.77□□□□□ -0.69
HDAC1-202ENST00000428704 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
HDAC1-202ENST00000428704 FRAT1Q92837 279 aaPredicted RBP10.77□□□□□ -0.69
HDAC1-202ENST00000428704 FAM161BQ96MY7 647 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
HDAC1-202ENST00000428704 COA1Q9GZY4 146 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 KIF16BQ96L93 1317 aa10.77□□□□□ -0.69
HDAC1-202ENST00000428704 LAMB1P07942 1786 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 SYN1P17600 705 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CAPN2P17655 700 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CTGFP29279 349 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 MAGEA10P43363 369 aaPredicted RBP10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 MVPQ14764 893 aaKnown RBP10.76□□□□□ -0.69
HDAC1-202ENST00000428704 EPHA10Q5JZY3 1008 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 ATF7IPQ6VMQ6 1270 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 NECAB2Q7Z6G3 386 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 PANK1Q8TE04 598 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 PAWRQ96IZ0 340 aaKnown RBP10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CDC5LQ99459 802 aaKnown RBP10.76□□□□□ -0.69
HDAC1-202ENST00000428704 ZCCHC17Q9NP64 241 aaKnown RBP10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CPA4Q9UI42 421 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 CSADQ9Y600 493 aa10.76□□□□□ -0.69
HDAC1-202ENST00000428704 TTC28Q96AY4 2481 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 BTBD19C9JJ37 291 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 GRM8O00222 908 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 CETPP11597 493 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 RLBP1P12271 317 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 ITGA6P23229 1130 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 GTF2IP78347 998 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 VGLL4Q14135 290 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 RASA3Q14644 834 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 E2F4Q16254 413 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 SLC4A10Q6U841 1118 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 MAFAQ8NHW3 353 aaPredicted RBP10.75□□□□□ -0.69
HDAC1-202ENST00000428704 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 DEFB118Q96PH6 123 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 DDX19BQ9UMR2 479 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 PTPRCP08575 1304 aa10.75□□□□□ -0.69
HDAC1-202ENST00000428704 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 PRKCZQ05513 592 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 CFAP100Q494V2 611 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-202ENST00000428704 C17orf99Q6UX52 265 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-202ENST00000428704 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 CHMP4BQ9H444 224 aaKnown RBP10.74□□□□□ -0.69
HDAC1-202ENST00000428704 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
HDAC1-202ENST00000428704 MINPP1Q9UNW1 487 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 PCDHAC2Q9Y5I4 1007 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 UTYO14607 1347 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
HDAC1-202ENST00000428704 EYSQ5T1H1 3165 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 TMEM265A0A087WTH1 108 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 TNFRSF10AO00220 468 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 IGHDP01880 384 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
HDAC1-202ENST00000428704 TRIM27P14373 513 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 CCT4P50991 539 aaKnown RBP10.73□□□□□ -0.69
HDAC1-202ENST00000428704 MTMR14Q8NCE2 650 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 DIS3LQ8TF46 1054 aaKnown RBP10.73□□□□□ -0.69
HDAC1-202ENST00000428704 SUCLG2Q96I99 432 aa10.73□□□□□ -0.69
HDAC1-202ENST00000428704 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
HDAC1-202ENST00000428704 NOB1Q9ULX3 412 aaKnown RBP10.73□□□□□ -0.69
HDAC1-202ENST00000428704 SPDYE5A6NIY4 337 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-202ENST00000428704 INHAP05111 366 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 RBM5P52756 815 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC1-202ENST00000428704 FCGRTP55899 365 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 TNFAIP1Q13829 316 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 LMBR1LQ6UX01 489 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 FAM205AQ6ZU69 1335 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 MUC3AQ02505 3323 aa10.72□□□□□ -0.69
HDAC1-202ENST00000428704 ANKRD18BA2A2Z9 1011 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ADCY3O60266 1144 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 KLRK1P26718 216 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 IGHMBP2P38935 993 aaKnown RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 FTSJ3Q8IY81 847 aaKnown RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ZNF710Q8N1W2 664 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms