RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GOLGA8BA8MQT2 603 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 RAD17O75943 681 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 MFSD14BQ5SR56 506 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 TMED8Q6PL24 325 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-206ENST00000428680 CEP131Q9UPN4 1083 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 MX1P20591 662 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 MCM2P49736 904 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 TBC1D9BQ66K14 1250 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 CHST3Q7LGC8 479 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 C21orf2O43822 256 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ITGA6P23229 1130 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 SSR1P43307 286 aaKnown RBP8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ZBTB33Q86T24 672 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 CERS3Q8IU89 383 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 APOBEC3FQ8IUX4 373 aaKnown RBP8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ZNF34Q8IZ26 560 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ERMNQ8TAM6 284 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 KIF20AO95235 890 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ME1P48163 572 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 ALDH1L2Q3SY69 923 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
CNOT4-206ENST00000428680 HAND2P61296 217 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 SYCP3Q8IZU3 236 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 MIGA1Q8NAN2 632 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 NAT10Q9H0A0 1025 aaKnown RBP8.35□□□□□ -1.07
CNOT4-206ENST00000428680 TCP10L2B9ZVM9 353 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 SMC2O95347 1197 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 PRMT2P55345 433 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 BIRC2Q13490 618 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC39Q9UFE4 941 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 STK25O00506 426 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 EIF4A1P60842 406 aaKnown RBP8.35□□□□□ -1.07
CNOT4-206ENST00000428680 CETN1Q12798 172 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 SF3B3Q15393 1217 aaKnown RBP8.35□□□□□ -1.07
CNOT4-206ENST00000428680 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 LUC7LQ9NQ29 371 aaKnown RBP8.35□□□□□ -1.07
CNOT4-206ENST00000428680 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 PASKQ96RG2 1323 aa8.35□□□□□ -1.07
CNOT4-206ENST00000428680 NBPF7P0C2Y1 421 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 HSPA1AP0DMV8 641 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 HSPA1BP0DMV9 641 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 TCP11L1Q9NUJ3 509 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 LEMD3Q9Y2U8 911 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 ANKRD36CQ5JPF3 1778 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 IFIT1BQ5T764 474 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC174Q6PII3 467 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 CEP57L1Q8IYX8 460 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 NMRK2Q9NPI5 230 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 PGAP2Q9UHJ9 254 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 SAP30BPQ9UHR5 308 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 PTPDC1A2A3K4 754 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 HMGB1P09429 215 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 CCDC129Q6ZRS4 1044 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 ZNHIT6Q9NWK9 470 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 LAMB2P55268 1798 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 IDEP14735 1019 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 OSBPP22059 807 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 ZCCHC17Q9NP64 241 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 PDRG1Q9NUG6 133 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 USP40Q9NVE5 1235 aa8.34□□□□□ -1.07
CNOT4-206ENST00000428680 NOP58Q9Y2X3 529 aaKnown RBP8.34□□□□□ -1.07
CNOT4-206ENST00000428680 CHRNA5P30532 468 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 NUCB2P80303 420 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 WTAPQ15007 396 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 KRT23Q9C075 422 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 AZI2Q9H6S1 392 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 ABCC12Q96J65 1359 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 GNAT2P19087 354 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 BCAMP50895 628 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 KCTD2Q14681 263 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 PODNQ7Z5L7 613 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 MICU3Q86XE3 530 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 TRIM6Q9C030 488 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 PHAXQ9H814 394 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 SBF1O95248 1867 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 NFKBIEO00221 500 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 TBCAO75347 108 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 GNRH1P01148 92 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 CETN2P41208 172 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 SSRP1Q08945 709 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 PUM3Q15397 648 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 TMTC2Q8N394 836 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
CNOT4-206ENST00000428680 HACE1Q8IYU2 909 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 PDILTQ8N807 584 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 CCDC148Q8NFR7 591 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 CALML4Q96GE6 196 aa8.33□□□□□ -1.08
CNOT4-206ENST00000428680 LBHD1Q9BQE6 289 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms