RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 CTDSPL2Q05D32 466 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 CMTR1Q8N1G2 835 aaKnown RBP18.09■□□□□ 0.49
GHDC-203ENST00000428494 LY9Q9HBG7 655 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 TACC3Q9Y6A5 838 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 WDR19Q8NEZ3 1342 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 CDKL5O76039 1030 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 ITGA6P23229 1130 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 PLA2G4AP47712 749 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 FMR1Q06787 632 aaKnown RBP eCLIP18.09■□□□□ 0.49
GHDC-203ENST00000428494 TMEM67Q5HYA8 995 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 TRMT44Q8IYL2 757 aaKnown RBP18.09■□□□□ 0.49
GHDC-203ENST00000428494 MNS1Q8NEH6 495 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 WDR24Q96S15 920 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 PPP2R2CQ9Y2T4 447 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 MST1RQ04912 1400 aa18.09■□□□□ 0.49
GHDC-203ENST00000428494 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.49
GHDC-203ENST00000428494 ERVV-2B6SEH9 535 aa18.08■□□□□ 0.49
GHDC-203ENST00000428494 PRR29P0C7W0 189 aa18.08■□□□□ 0.49
GHDC-203ENST00000428494 MDM2Q00987 491 aaPredicted RBP18.08■□□□□ 0.49
GHDC-203ENST00000428494 TRIM29Q14134 588 aa18.08■□□□□ 0.49
GHDC-203ENST00000428494 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.49
GHDC-203ENST00000428494 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.49
GHDC-203ENST00000428494 FAM237AA0A1B0GTK4 181 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 PHKA1P46020 1223 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 TOB1P50616 345 aaPredicted RBP18.08■□□□□ 0.48
GHDC-203ENST00000428494 CPLX2Q6PUV4 134 aaKnown RBP18.08■□□□□ 0.48
GHDC-203ENST00000428494 TOGARAM2Q6ZUX3 1019 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 HELBQ8NG08 1087 aaPredicted RBP18.08■□□□□ 0.48
GHDC-203ENST00000428494 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.48
GHDC-203ENST00000428494 AKAP11Q9UKA4 1901 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 KCPQ6ZWJ8 1503 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 CUTAO60888 179 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 TADA3O75528 432 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
GHDC-203ENST00000428494 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 HLFQ16534 295 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 ZKSCAN3Q9BRR0 538 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
GHDC-203ENST00000428494 SNAP23O00161 211 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 POLR2DO15514 142 aaKnown RBP18.07■□□□□ 0.48
GHDC-203ENST00000428494 PDE6AP16499 860 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 ZBTB38Q8NAP3 1195 aaPredicted RBP18.07■□□□□ 0.48
GHDC-203ENST00000428494 TTLL11Q8NHH1 800 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 NOL10Q9BSC4 688 aaKnown RBP18.07■□□□□ 0.48
GHDC-203ENST00000428494 MAN1B1Q9UKM7 699 aa18.07■□□□□ 0.48
GHDC-203ENST00000428494 MYH7P12883 1935 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 ZRANB2O95218 330 aaKnown RBP eCLIP18.06■□□□□ 0.48
GHDC-203ENST00000428494 CDK11BP21127 795 aaKnown RBP18.06■□□□□ 0.48
GHDC-203ENST00000428494 GNG11P61952 73 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 DHX8Q14562 1220 aaKnown RBP18.06■□□□□ 0.48
GHDC-203ENST00000428494 KRI1Q8N9T8 703 aaKnown RBP18.06■□□□□ 0.48
GHDC-203ENST00000428494 BAG1Q99933 345 aaPredicted RBP18.06■□□□□ 0.48
GHDC-203ENST00000428494 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 NFE2L3Q9Y4A8 694 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 ADAMTSL3P82987 1691 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 IFIT3O14879 490 aaKnown RBP18.06■□□□□ 0.48
GHDC-203ENST00000428494 CCP110O43303 1012 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 TUBB4AP04350 444 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 MED15Q96RN5 788 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 DESI2Q9BSY9 194 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 SERTAD1Q9UHV2 236 aa18.06■□□□□ 0.48
GHDC-203ENST00000428494 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 NOSTRINQ8IVI9 506 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 TC2NQ8N9U0 490 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 AIDAQ96BJ3 306 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 STRBPQ96SI9 672 aaKnown RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 SAMSN1Q9NSI8 373 aaKnown RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 TMEM51Q9NW97 253 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 SLC12A7Q9Y666 1083 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 POLR3GO15318 223 aaPredicted RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 ARHGAP6O43182 974 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 ZSCAN12O43309 604 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 NR5A1Q13285 461 aa18.05■□□□□ 0.48
GHDC-203ENST00000428494 EPB41L4AQ9HCS5 686 aaPredicted RBP18.05■□□□□ 0.48
GHDC-203ENST00000428494 POSTNQ15063 836 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 RRP12Q5JTH9 1297 aaKnown RBP18.04■□□□□ 0.48
GHDC-203ENST00000428494 DIS3L2Q8IYB7 885 aaKnown RBP18.04■□□□□ 0.48
GHDC-203ENST00000428494 TMEM87BQ96K49 555 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 IRX2Q9BZI1 471 aaPredicted RBP18.04■□□□□ 0.48
GHDC-203ENST00000428494 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 PCDHB6Q9Y5E3 794 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 TCRBV5S4A2TA0A5A2 114 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
GHDC-203ENST00000428494 MTF1Q14872 753 aa18.04■□□□□ 0.48
GHDC-203ENST00000428494 ZBTB22O15209 634 aa18.03■□□□□ 0.48
GHDC-203ENST00000428494 PRKAB2O43741 272 aa18.03■□□□□ 0.48
GHDC-203ENST00000428494 KARSQ15046 597 aaKnown RBP18.03■□□□□ 0.48
GHDC-203ENST00000428494 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms