RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 SLC4A9Q96Q91 983 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 CNNM2Q9H8M5 875 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 EPB41L4AQ9HCS5 686 aaPredicted RBP9.08□□□□□ -0.96
LRCH3-204ENST00000428136 CNNM1Q9NRU3 951 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 WWC3Q9ULE0 1092 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
LRCH3-204ENST00000428136 B4E1Z4 1266 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 CCP110O43303 1012 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SMC2O95347 1197 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SFPQP23246 707 aaKnown RBP eCLIP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 MARCKSP29966 332 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 MYL5Q02045 173 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 NAA30Q147X3 362 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 PNPLA7Q6ZV29 1317 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 FOXP4Q8IVH2 680 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 WASF1Q92558 559 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 NOL10Q9BSC4 688 aaKnown RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 RREB1Q92766 1687 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SARSP49591 514 aaKnown RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 VSTM4Q8IW00 320 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF579Q8NAF0 562 aaKnown RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 STAG1Q8WVM7 1258 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 ARID3AQ99856 593 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 ZSWIM5Q9P217 1185 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 PHLPP2Q6ZVD8 1323 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 BIN1O00499 593 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 MMP1P03956 469 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 TBX2Q13207 712 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 NOSTRINQ8IVI9 506 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SPATA5Q8NB90 893 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 PHKBQ93100 1093 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 KRT23Q9C075 422 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 FOXP1Q9H334 677 aaPredicted RBP9.07□□□□□ -0.96
LRCH3-204ENST00000428136 SLAIN2Q9P270 581 aa9.07□□□□□ -0.96
LRCH3-204ENST00000428136 RTL9Q8NET4 1388 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 GOLGA8AA7E2F4 631 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 GSG1L2A8MUP6 293 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 IDH1O75874 414 aaKnown RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 GNAT2P19087 354 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 TOB1P50616 345 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 SSRP1Q08945 709 aaKnown RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 LONRF3Q496Y0 759 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 TMEM67Q5HYA8 995 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 AKNAD1Q5T1N1 836 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 KRI1Q8N9T8 703 aaKnown RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 CICQ96RK0 1608 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 LAMB2P55268 1798 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 SPDYE4A6NLX3 237 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 ATP1A3P13637 1013 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 BMP6P22004 513 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 PTPREP23469 700 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 PNOCQ13519 176 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 TRIM29Q14134 588 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 SPATA20Q8TB22 786 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
LRCH3-204ENST00000428136 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 FBXO2Q9UK22 296 aaPredicted RBP9.06□□□□□ -0.96
LRCH3-204ENST00000428136 NRDCO43847 1150 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 GPTP24298 496 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 UBASH3AP57075 661 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 GABPB1Q06547 395 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-204ENST00000428136 TRIM65Q6PJ69 517 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 TMEM139Q8IV31 216 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 DPF2Q92785 391 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 CLIC6Q96NY7 704 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 APPP05067 770 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF18P17022 549 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-204ENST00000428136 EVA1CP58658 441 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 MAP3K12Q12852 859 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 CT47A1Q5JQC4 288 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-204ENST00000428136 MICU3Q86XE3 530 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 TMTC2Q8N394 836 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 TRIML1Q8N9V2 468 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 PRDM10Q9NQV6 1147 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 KIF20AO95235 890 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 SLC5A1P13866 664 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 RXRAP19793 462 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 ETF1P62495 437 aaKnown RBP9.05□□□□□ -0.96
LRCH3-204ENST00000428136 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 RILPL1Q5EBL4 403 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms