RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MSL1Q68DK7 614 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 EXOC4Q96A65 974 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 TRIM7Q9C029 511 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 ARHGEF35A5YM69 484 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CHMP2AO43633 222 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 HIBADHP31937 336 aaKnown RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 TSNAXIP1Q2TAA8 658 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 BTN2A1Q7KYR7 527 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 ECHDC1Q9NTX5 307 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 TACC3Q9Y6A5 838 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 PSMA7O14818 248 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 PDE4DQ08499 809 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 INF2Q27J81 1249 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 KIAA1841Q6NSI8 718 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CHST3Q7LGC8 479 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 METTL23Q86XA0 190 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 C1orf131Q8NDD1 294 aaKnown RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 XAGE3Q8WTP9 111 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CCDC189A1A4V9 331 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CSPG5O95196 566 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 SEL1L2Q5TEA6 688 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 CCDC129Q6ZRS4 1044 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 WDR66Q8TBY9 1149 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 PMM1Q92871 262 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 GLG1Q92896 1179 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 TRPC5Q9UL62 973 aaPredicted RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 AKR1B10O60218 316 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 C4orf50Q6ZRC1 276 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 FCHSD1Q86WN1 690 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 RPUSD2Q8IZ73 545 aaKnown RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 FBXO41Q8TF61 875 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 ADPGKQ9BRR6 497 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 QTRT2Q9H974 415 aaKnown RBP6.41□□□□□ -1.38
HERC4-206ENST00000427635 LRRC9Q6ZRR7 1453 aa6.41□□□□□ -1.38
HERC4-206ENST00000427635 STX1AQ16623 288 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 ODR4Q5SWX8 454 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 HAUS3Q68CZ6 603 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 NEK11Q8NG66 645 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 TTC14Q96N46 770 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 LBHD1Q9BQE6 289 aaPredicted RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 ALG1Q9BT22 464 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 PLCH2O75038 1416 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 KLF18A0A0U1RQI7 1052 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 HOXA2O43364 376 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 TMOD1P28289 359 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 RNASELQ05823 741 aaKnown RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 KRT33BQ14525 404 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 CCDC92Q53HC0 331 aaPredicted RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 C2orf69Q8N8R5 385 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 CCDC110Q8TBZ0 833 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 JARID2Q92833 1246 aaPredicted RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 PPANQ9NQ55 473 aaKnown RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 DDX39AO00148 427 aaKnown RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 ATP2C2O75185 946 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 GIGYF1O75420 1035 aaPredicted RBP6.4□□□□□ -1.38
HERC4-206ENST00000427635 PPP1R7Q15435 360 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 SLC9C2Q5TAH2 1124 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 ZBTB8OSQ8IWT0 167 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 EPSTI1Q96J88 318 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 MPP4Q96JB8 637 aa6.4□□□□□ -1.38
HERC4-206ENST00000427635 FTOQ9C0B1 505 aaKnown RBP eCLIP6.4□□□□□ -1.38
HERC4-206ENST00000427635 UHRF1BP1LA0JNW5 1464 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 PPP2R5CQ13362 524 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 CTR9Q6PD62 1173 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 CABLES1Q8TDN4 633 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 MTUS1Q9ULD2 1270 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 ATP8B3O60423 1300 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 CCDC171Q6TFL3 1326 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 F8W8V4 182 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 M0R2C6 588 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 N4BP3O15049 544 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 ZSCAN20P17040 1043 aaPredicted RBP6.4□□□□□ -1.39
HERC4-206ENST00000427635 CCDC6Q16204 474 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 FAM160B1Q5W0V3 765 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 FASTKD5Q7L8L6 764 aaKnown RBP6.4□□□□□ -1.39
HERC4-206ENST00000427635 CPXCR1Q8N123 301 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 CNKSR1Q969H4 720 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 JAG2Q9Y219 1238 aa6.4□□□□□ -1.39
HERC4-206ENST00000427635 FNDC3AQ9Y2H6 1198 aaKnown RBP6.4□□□□□ -1.39
HERC4-206ENST00000427635 ARHGEF37A1IGU5 675 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 ELF1P32519 619 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 AFMP43652 599 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 NUCB1Q02818 461 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 ITKQ08881 620 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 SUPT20HL1Q3ZLR7 823 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 CCDC183Q5T5S1 534 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 RYBPQ8N488 228 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 TMEM57Q8N5G2 664 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 SLC7A5P2Q9GIP4 190 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 F6X3S4 739 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 HEXIM1O94992 359 aaKnown RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 MYCP01106 439 aaPredicted RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 POLR2BP30876 1174 aaKnown RBP6.39□□□□□ -1.39
HERC4-206ENST00000427635 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 NSMFQ6X4W1 530 aa6.39□□□□□ -1.39
HERC4-206ENST00000427635 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms