RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SPDYE5A6NIY4 337 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 APBB1O00213 710 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 DCAF15Q66K64 600 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 ABHD8Q96I13 439 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 MCOLN1Q9GZU1 580 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 CSADQ9Y600 493 aa23.48■■□□□ 1.35
COL9A2-204ENST00000427563 HMMRO75330 724 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 GSTO1P78417 241 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 PICALMQ13492 652 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 HSP90AB4PQ58FF6 505 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 HOOK2Q96ED9 719 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 OTUD5Q96G74 571 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 ANTXR1Q9H6X2 564 aa23.47■■□□□ 1.35
COL9A2-204ENST00000427563 PHF20L1A8MW92 1017 aa23.46■■□□□ 1.35
COL9A2-204ENST00000427563 LDHCP07864 332 aa23.46■■□□□ 1.35
COL9A2-204ENST00000427563 INHBEP58166 350 aa23.46■■□□□ 1.35
COL9A2-204ENST00000427563 ZNF296Q8WUU4 475 aaPredicted RBP23.46■■□□□ 1.35
COL9A2-204ENST00000427563 KIF1BPQ96EK5 621 aa23.46■■□□□ 1.35
COL9A2-204ENST00000427563 YTHDC1Q96MU7 727 aaKnown RBP23.46■■□□□ 1.35
COL9A2-204ENST00000427563 GPR25O00155 361 aa23.45■■□□□ 1.34
COL9A2-204ENST00000427563 MAP3K10Q02779 954 aa23.45■■□□□ 1.34
COL9A2-204ENST00000427563 SH3RF3Q8TEJ3 882 aaPredicted RBP23.45■■□□□ 1.34
COL9A2-204ENST00000427563 CHMP4BQ9H444 224 aaKnown RBP23.45■■□□□ 1.34
COL9A2-204ENST00000427563 PHIPQ8WWQ0 1821 aa23.45■■□□□ 1.34
COL9A2-204ENST00000427563 NPM3O75607 178 aaKnown RBP23.44■■□□□ 1.34
COL9A2-204ENST00000427563 DGKZQ13574 1117 aa23.44■■□□□ 1.34
COL9A2-204ENST00000427563 NOM1Q5C9Z4 860 aaKnown RBP23.44■■□□□ 1.34
COL9A2-204ENST00000427563 NAA16Q6N069 864 aaPredicted RBP23.44■■□□□ 1.34
COL9A2-204ENST00000427563 ERO1BQ86YB8 467 aa23.44■■□□□ 1.34
COL9A2-204ENST00000427563 DOCK1Q14185 1865 aa23.43■■□□□ 1.34
COL9A2-204ENST00000427563 IRF6O14896 467 aa23.43■■□□□ 1.34
COL9A2-204ENST00000427563 NOL9Q5SY16 702 aaKnown RBP23.43■■□□□ 1.34
COL9A2-204ENST00000427563 AATFQ9NY61 560 aaKnown RBP eCLIP23.43■■□□□ 1.34
COL9A2-204ENST00000427563 COL2A1P02458 1487 aaPredicted RBP23.43■■□□□ 1.34
COL9A2-204ENST00000427563 RAB11FIP3O75154 756 aa23.42■■□□□ 1.34
COL9A2-204ENST00000427563 ALDH1A1P00352 501 aa23.42■■□□□ 1.34
COL9A2-204ENST00000427563 RRP1P56182 461 aaKnown RBP23.42■■□□□ 1.34
COL9A2-204ENST00000427563 PPP4CP60510 307 aa23.42■■□□□ 1.34
COL9A2-204ENST00000427563 PPIL2Q13356 520 aa23.42■■□□□ 1.34
COL9A2-204ENST00000427563 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
COL9A2-204ENST00000427563 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
COL9A2-204ENST00000427563 MAP4K4O95819 1239 aaPredicted RBP23.41■■□□□ 1.34
COL9A2-204ENST00000427563 GTF2A2P52657 109 aa23.41■■□□□ 1.34
COL9A2-204ENST00000427563 DYNLL1P63167 89 aaKnown RBP23.41■■□□□ 1.34
COL9A2-204ENST00000427563 CCL15Q16663 113 aa23.41■■□□□ 1.34
COL9A2-204ENST00000427563 ZSCAN29Q8IWY8 852 aaPredicted RBP23.41■■□□□ 1.34
COL9A2-204ENST00000427563 TEX11Q8IYF3 940 aa23.41■■□□□ 1.34
COL9A2-204ENST00000427563 CLASRPQ8N2M8 674 aaKnown RBP23.41■■□□□ 1.34
COL9A2-204ENST00000427563 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
COL9A2-204ENST00000427563 PTPRFP10586 1907 aa23.4■■□□□ 1.34
COL9A2-204ENST00000427563 FAM196BA6NMK8 535 aa23.4■■□□□ 1.34
COL9A2-204ENST00000427563 PPATQ06203 517 aa23.4■■□□□ 1.34
COL9A2-204ENST00000427563 CRHR2Q13324 411 aa23.4■■□□□ 1.34
COL9A2-204ENST00000427563 ATAD5Q96QE3 1844 aa23.4■■□□□ 1.34
COL9A2-204ENST00000427563 SMARCA5O60264 1052 aaPredicted RBP23.39■■□□□ 1.33
COL9A2-204ENST00000427563 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.33
COL9A2-204ENST00000427563 CAP1Q01518 475 aa23.39■■□□□ 1.33
COL9A2-204ENST00000427563 CTU1Q7Z7A3 348 aaKnown RBP23.39■■□□□ 1.33
COL9A2-204ENST00000427563 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.39■■□□□ 1.33
COL9A2-204ENST00000427563 PCDHB15Q9Y5E8 787 aa23.39■■□□□ 1.33
COL9A2-204ENST00000427563 IGSF3O75054 1194 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 CYP7A1P22680 504 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 MOGSQ13724 837 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 RRP1BQ14684 758 aaKnown RBP23.38■■□□□ 1.33
COL9A2-204ENST00000427563 MAGEB6Q8N7X4 407 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.38■■□□□ 1.33
COL9A2-204ENST00000427563 EDC3Q96F86 508 aaKnown RBP23.38■■□□□ 1.33
COL9A2-204ENST00000427563 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 KCNH4Q9UQ05 1017 aa23.38■■□□□ 1.33
COL9A2-204ENST00000427563 BTBD19C9JJ37 291 aa23.37■■□□□ 1.33
COL9A2-204ENST00000427563 TBC1D12O60347 775 aa23.37■■□□□ 1.33
COL9A2-204ENST00000427563 FKTNO75072 461 aa23.37■■□□□ 1.33
COL9A2-204ENST00000427563 IFIT2P09913 472 aaKnown RBP23.37■■□□□ 1.33
COL9A2-204ENST00000427563 SCYL3Q8IZE3 742 aa23.37■■□□□ 1.33
COL9A2-204ENST00000427563 MYH1P12882 1939 aa23.37■■□□□ 1.33
COL9A2-204ENST00000427563 FLT1P17948 1338 aa23.36■■□□□ 1.33
COL9A2-204ENST00000427563 BAG3O95817 575 aa23.36■■□□□ 1.33
COL9A2-204ENST00000427563 MAPKAPK5Q8IW41 473 aa23.36■■□□□ 1.33
COL9A2-204ENST00000427563 TGFBRAP1Q8WUH2 860 aa23.36■■□□□ 1.33
COL9A2-204ENST00000427563 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
COL9A2-204ENST00000427563 DDX60LQ5H9U9 1706 aaKnown RBP23.36■■□□□ 1.33
COL9A2-204ENST00000427563 CETPP11597 493 aa23.35■■□□□ 1.33
COL9A2-204ENST00000427563 SNAPC2Q13487 334 aa23.35■■□□□ 1.33
COL9A2-204ENST00000427563 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
COL9A2-204ENST00000427563 CCDC84Q86UT8 332 aaPredicted RBP23.35■■□□□ 1.33
COL9A2-204ENST00000427563 MIGA1Q8NAN2 632 aa23.35■■□□□ 1.33
COL9A2-204ENST00000427563 ZSWIM8A7E2V4 1837 aa23.35■■□□□ 1.33
COL9A2-204ENST00000427563 HTTP42858 3142 aa23.34■■□□□ 1.33
COL9A2-204ENST00000427563 PTPRAP18433 802 aa23.34■■□□□ 1.33
COL9A2-204ENST00000427563 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
COL9A2-204ENST00000427563 NOL10Q9BSC4 688 aaKnown RBP23.34■■□□□ 1.33
COL9A2-204ENST00000427563 LRRCC1Q9C099 1032 aa23.34■■□□□ 1.33
COL9A2-204ENST00000427563 DNAJC18Q9H819 358 aa23.34■■□□□ 1.33
COL9A2-204ENST00000427563 MYH7P12883 1935 aa23.33■■□□□ 1.33
COL9A2-204ENST00000427563 GOLIM4O00461 696 aa23.33■■□□□ 1.33
COL9A2-204ENST00000427563 PLCG2P16885 1265 aa23.33■■□□□ 1.33
COL9A2-204ENST00000427563 TAF1CQ15572 869 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-204ENST00000427563 DNAJC2Q99543 621 aaKnown RBP23.33■■□□□ 1.33
COL9A2-204ENST00000427563 RIOK1Q9BRS2 568 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms