RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 POLR3DP05423 398 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 CLCN1P35523 988 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 MECOMQ03112 1051 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 GRAPQ13588 217 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 WTAPQ15007 396 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 AIFM3Q96NN9 605 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 ANAPC4Q9UJX5 808 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 ME1P48163 572 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 TYRO3Q06418 890 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 NTRK3Q16288 839 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 NSUN4Q96CB9 384 aaKnown RBP16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 DUOX1Q9NRD9 1551 aa16.3■□□□□ 0.2
APOBEC3D-202ENST00000427494 NID2Q14112 1375 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 IRS2Q9Y4H2 1338 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 SSRP1Q08945 709 aaKnown RBP16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 CLIC4Q9Y696 253 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
APOBEC3D-202ENST00000427494 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 STK38Q15208 465 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 KRT40Q6A162 431 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 ESR2Q92731 530 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 JAG2Q9Y219 1238 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 LAMB1P07942 1786 aa16.28■□□□□ 0.2
APOBEC3D-202ENST00000427494 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 PRDX5P30044 214 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 TRIM29Q14134 588 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 RTN1Q16799 776 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.2
APOBEC3D-202ENST00000427494 GYS1P13807 737 aa16.27■□□□□ 0.19
APOBEC3D-202ENST00000427494 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.19
APOBEC3D-202ENST00000427494 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.19
APOBEC3D-202ENST00000427494 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.19
APOBEC3D-202ENST00000427494 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
APOBEC3D-202ENST00000427494 TNKSO95271 1327 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 YEATS4O95619 227 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 ADCY5O95622 1261 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 IFNAR1P17181 557 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 ST5P78524 1137 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 SASS6Q6UVJ0 657 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 FAM200AQ8TCP9 573 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 XDHP47989 1333 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 ANO6Q4KMQ2 910 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
APOBEC3D-202ENST00000427494 SPTLC2O15270 562 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 CTAGE5O15320 804 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 SERPINB2P05120 415 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 RCAN1P53805 252 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 SNW1Q13573 536 aaKnown RBP16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 SEC23AQ15436 765 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 WASF1Q92558 559 aa16.25■□□□□ 0.19
APOBEC3D-202ENST00000427494 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms