RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ZAP70P43403 619 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 MAP3K10Q02779 954 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 NAA16Q6N069 864 aaPredicted RBP13.17□□□□□ -0.3
LINC01238-202ENST00000426962 AACSQ86V21 672 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 ZSCAN29Q8IWY8 852 aaPredicted RBP13.17□□□□□ -0.3
LINC01238-202ENST00000426962 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
LINC01238-202ENST00000426962 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
LINC01238-202ENST00000426962 DDX4Q9NQI0 724 aaKnown RBP13.17□□□□□ -0.3
LINC01238-202ENST00000426962 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 FKTNO75072 461 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 BAG3O95817 575 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 INPP5BP32019 993 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 PPATQ06203 517 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 PICALMQ13492 652 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
LINC01238-202ENST00000426962 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
LINC01238-202ENST00000426962 IL1RAPL2Q9NP60 686 aa13.16□□□□□ -0.3
LINC01238-202ENST00000426962 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
LINC01238-202ENST00000426962 IRF6O14896 467 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 CETPP11597 493 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 PPP4CP60510 307 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 PPIL2Q13356 520 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
LINC01238-202ENST00000426962 CCL15Q16663 113 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
LINC01238-202ENST00000426962 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
LINC01238-202ENST00000426962 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 APBB1O00213 710 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 TBC1D12O60347 775 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 IFIT2P09913 472 aaKnown RBP13.14□□□□□ -0.31
LINC01238-202ENST00000426962 PLCG2P16885 1265 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 SNAPC2Q13487 334 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 PIH1D3Q9NQM4 214 aaKnown RBP13.14□□□□□ -0.31
LINC01238-202ENST00000426962 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC01238-202ENST00000426962 RFX7Q2KHR2 1363 aa13.14□□□□□ -0.31
LINC01238-202ENST00000426962 ATRNL1Q5VV63 1379 aa13.13□□□□□ -0.31
LINC01238-202ENST00000426962 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
LINC01238-202ENST00000426962 CRHR2Q13324 411 aa13.13□□□□□ -0.31
LINC01238-202ENST00000426962 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-202ENST00000426962 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-202ENST00000426962 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
LINC01238-202ENST00000426962 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
LINC01238-202ENST00000426962 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
LINC01238-202ENST00000426962 CYP7A1P22680 504 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 MAP3K12Q12852 859 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
LINC01238-202ENST00000426962 SCYL3Q8IZE3 742 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01238-202ENST00000426962 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01238-202ENST00000426962 ZCCHC17Q9NP64 241 aaKnown RBP13.12□□□□□ -0.31
LINC01238-202ENST00000426962 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
LINC01238-202ENST00000426962 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 BTBD19C9JJ37 291 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 CXCL11O14625 94 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 SP3Q02447 781 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
LINC01238-202ENST00000426962 ADGRA1Q86SQ6 560 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 BCL11AQ9H165 835 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
LINC01238-202ENST00000426962 PICK1Q9NRD5 415 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
LINC01238-202ENST00000426962 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
LINC01238-202ENST00000426962 PTPRAP18433 802 aa13.1□□□□□ -0.31
LINC01238-202ENST00000426962 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
LINC01238-202ENST00000426962 LRRCC1Q9C099 1032 aa13.1□□□□□ -0.31
LINC01238-202ENST00000426962 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
LINC01238-202ENST00000426962 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
LINC01238-202ENST00000426962 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
LINC01238-202ENST00000426962 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
LINC01238-202ENST00000426962 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
LINC01238-202ENST00000426962 YTHDC1Q96MU7 727 aaKnown RBP13.09□□□□□ -0.31
LINC01238-202ENST00000426962 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
LINC01238-202ENST00000426962 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
LINC01238-202ENST00000426962 LAMB1P07942 1786 aa13.09□□□□□ -0.31
LINC01238-202ENST00000426962 COL2A1P02458 1487 aaPredicted RBP13.09□□□□□ -0.31
LINC01238-202ENST00000426962 TLR2O60603 784 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 ATP5JP18859 108 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
LINC01238-202ENST00000426962 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
LINC01238-202ENST00000426962 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
LINC01238-202ENST00000426962 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
LINC01238-202ENST00000426962 BOLA2Q9H3K6 86 aa13.08□□□□□ -0.32
LINC01238-202ENST00000426962 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms