RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CDKL5O76039 1030 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 TRIM29Q14134 588 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 ADALQ6DHV7 355 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 ARMCX5Q6P1M9 558 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 CCAR2Q8N163 923 aaKnown RBP14.99□□□□□ -0.01
COL12A1-205ENST00000425443 FBXL16Q8N461 479 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 LRP2BPQ9P2M1 347 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 ARID4AP29374 1257 aaPredicted RBP14.99□□□□□ -0.01
COL12A1-205ENST00000425443 TDO2P48775 406 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 TMEM67Q5HYA8 995 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 TRERF1Q96PN7 1200 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 XPO4Q9C0E2 1151 aaKnown RBP14.99□□□□□ -0.01
COL12A1-205ENST00000425443 NBPF3Q9H094 633 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
COL12A1-205ENST00000425443 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
COL12A1-205ENST00000425443 PTPN14Q15678 1187 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 CYB5R4Q7L1T6 521 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 ALG1Q9BT22 464 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 KIAA1468Q9P260 1216 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 IQSEC3Q9UPP2 1182 aaPredicted RBP14.98□□□□□ -0.01
COL12A1-205ENST00000425443 DDX60Q8IY21 1712 aaKnown RBP14.98□□□□□ -0.01
COL12A1-205ENST00000425443 LOC102724428A0A0B4J2F2 783 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 ATP2B1P20020 1258 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 SIK1P57059 783 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 RASGRF1Q13972 1273 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 E4F1Q66K89 784 aaPredicted RBP14.98□□□□□ -0.01
COL12A1-205ENST00000425443 KCNG4Q8TDN1 519 aa14.98□□□□□ -0.01
COL12A1-205ENST00000425443 IFIT3O14879 490 aaKnown RBP14.97□□□□□ -0.01
COL12A1-205ENST00000425443 SPTLC2O15270 562 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 ZBTB43O43298 467 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 CTDSPL2Q05D32 466 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 NCAPHQ15003 741 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 SPECC1Q5M775 1068 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 BRAPQ7Z569 592 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 STRBPQ96SI9 672 aaKnown RBP14.97□□□□□ -0.01
COL12A1-205ENST00000425443 NACAP1Q9BZK3 213 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 HSD3B7Q9H2F3 369 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 IFNKQ9P0W0 207 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 BCAMP50895 628 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 CDCA7Q9BWT1 371 aaPredicted RBP14.97□□□□□ -0.01
COL12A1-205ENST00000425443 ABCF2Q9UG63 623 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 GOLGA8AA7E2F4 631 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 LMOD1P29536 600 aaPredicted RBP14.97□□□□□ -0.01
COL12A1-205ENST00000425443 PARP10Q53GL7 1025 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
COL12A1-205ENST00000425443 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 AK7Q96M32 723 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 ZKSCAN3Q9BRR0 538 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 SLC12A7Q9Y666 1083 aa14.97□□□□□ -0.01
COL12A1-205ENST00000425443 C4AP0C0L4 1744 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 C4BP0C0L5 1744 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 IARSP41252 1262 aaKnown RBP14.96□□□□□ -0.01
COL12A1-205ENST00000425443 SYCP1Q15431 976 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 IFNL3Q8IZI9 196 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
COL12A1-205ENST00000425443 TMEM87BQ96K49 555 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 DISP2A7MBM2 1401 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 ZMYM6O95789 1325 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
COL12A1-205ENST00000425443 ELF2Q15723 593 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 INTS5Q6P9B9 1019 aaKnown RBP14.96□□□□□ -0.02
COL12A1-205ENST00000425443 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 MIGA1Q8NAN2 632 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 BANK1Q8NDB2 785 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 NAT10Q9H0A0 1025 aaKnown RBP14.96□□□□□ -0.02
COL12A1-205ENST00000425443 SLC4A4Q9Y6R1 1079 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 NHSL1Q5SYE7 1610 aa14.96□□□□□ -0.02
COL12A1-205ENST00000425443 A0A1W2PQ27 194 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 A0A1W2PQ64 194 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 A0A1W2PQD8 194 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 SH2B2O14492 632 aaPredicted RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 ZNF202O95125 648 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 APOA5Q6Q788 366 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 TMC6Q7Z403 805 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 CLIC6Q96NY7 704 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 NUP98P52948 1817 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 MYH3P11055 1940 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 ERICH2A1L162 156 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 SLC3A2P08195 630 aaKnown RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 PFKFB1P16118 471 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 FGFR2P21802 821 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 KIF23Q02241 960 aaPredicted RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 GOLGA8FQ08AF8 430 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 GOLGA8DPQ0D2H9 430 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 SART3Q15020 963 aaKnown RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 KIF18AQ8NI77 898 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 ZNF652Q9Y2D9 606 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 LRP6O75581 1613 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 BICDL1Q6ZP65 573 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 DPF2Q92785 391 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 POLR3EQ9NVU0 708 aa14.95□□□□□ -0.02
COL12A1-205ENST00000425443 DDX41Q9UJV9 622 aaKnown RBP14.95□□□□□ -0.02
COL12A1-205ENST00000425443 MYH7P12883 1935 aa14.94□□□□□ -0.02
COL12A1-205ENST00000425443 YEATS4O95619 227 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms