RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 WDR24Q96S15 920 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 ERICH4A6NGS2 130 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 ZBTB43O43298 467 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 KCNJ6P48051 423 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 USP49Q70CQ1 688 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 ASAP1Q9ULH1 1129 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
TPM3P9-201ENST00000424846 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.21
TPM3P9-201ENST00000424846 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.21
TPM3P9-201ENST00000424846 PLA2G4AP47712 749 aa16.33■□□□□ 0.21
TPM3P9-201ENST00000424846 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
TPM3P9-201ENST00000424846 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 TOP1P11387 765 aaKnown RBP16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 PDE6AP16499 860 aa16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 TOGARAM2Q6ZUX3 1019 aa16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
TPM3P9-201ENST00000424846 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PNMA6AP0CW24 399 aaPredicted RBP16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PDILTQ8N807 584 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 FAM237AA0A1B0GTK4 181 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 TCRBV5S4A2TA0A5A2 114 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 ATP2B1P20020 1258 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 NR5A1Q13285 461 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 DESI2Q9BSY9 194 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 A0A0U1RQJ8 604 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PRKAB2O43741 272 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 TADA3O75528 432 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 CCDC102BQ68D86 513 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 ATRIPQ8WXE1 791 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PPP2R2CQ9Y2T4 447 aa16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
TPM3P9-201ENST00000424846 PHLPP2Q6ZVD8 1323 aa16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 MTF1Q14872 753 aa16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 ZBTB9Q96C00 473 aa16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 IRX2Q9BZI1 471 aaPredicted RBP16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 SERTAD1Q9UHV2 236 aa16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
TPM3P9-201ENST00000424846 POLR2DO15514 142 aaKnown RBP16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 CUTAO60888 179 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.27e-6■■■□□ 15
TPM3P9-201ENST00000424846 TC2NQ8N9U0 490 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 ZBTB22O15209 634 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 CASP1P29466 404 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 JMYQ8N9B5 988 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 UBXN4Q92575 508 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
TPM3P9-201ENST00000424846 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 TBX2Q13207 712 aaPredicted RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 NRDCO43847 1150 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 SASH3O75995 380 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 CDKL5O76039 1030 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 BMS1Q14692 1282 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 NLRP10Q86W26 655 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 KRI1Q8N9T8 703 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 PLA2G12BQ9BX93 195 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 FBXO2Q9UK22 296 aaPredicted RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 MBD4O95243 580 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 TRIM29Q14134 588 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 AIDAQ96BJ3 306 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
TPM3P9-201ENST00000424846 GNG11P61952 73 aa16.28■□□□□ 0.2
TPM3P9-201ENST00000424846 POSTNQ15063 836 aa16.28■□□□□ 0.2
TPM3P9-201ENST00000424846 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms