RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 SLC44A5Q8NCS7 719 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 KIF2CQ99661 725 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
PRPF39-202ENST00000424478 DSCC1Q9BVC3 393 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 HSPA4P34932 840 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 H7C1D1 291 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 ZNF70Q9UC06 446 aaPredicted RBP16.03■□□□□ 0.16
PRPF39-202ENST00000424478 POLR2AP24928 1970 aaKnown RBP16.03■□□□□ 0.16
PRPF39-202ENST00000424478 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
PRPF39-202ENST00000424478 ECM29Q5VYK3 1845 aa16.02■□□□□ 0.16
PRPF39-202ENST00000424478 PCNTO95613 3336 aa16.02■□□□□ 0.16
PRPF39-202ENST00000424478 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 ZNF280AP59817 542 aaPredicted RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 NOL8Q76FK4 1167 aaKnown RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 ZSCAN29Q8IWY8 852 aaPredicted RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 DPF2Q92785 391 aa16.02■□□□□ 0.15
PRPF39-202ENST00000424478 TMEM39BQ9GZU3 492 aa16.02■□□□□ 0.15
PRPF39-202ENST00000424478 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.15
PRPF39-202ENST00000424478 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 DDTLA6NHG4 134 aaPredicted RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 POTECB2RU33 542 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 SH3BP5LQ7L8J4 393 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 HACL1Q9UJ83 578 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 NAV1Q8NEY1 1877 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 HDLBPQ00341 1268 aaKnown RBP16.01■□□□□ 0.15
PRPF39-202ENST00000424478 MYH1P12882 1939 aa16.01■□□□□ 0.15
PRPF39-202ENST00000424478 ZNF213O14771 459 aa16■□□□□ 0.15
PRPF39-202ENST00000424478 DTNBO60941 627 aa16■□□□□ 0.15
PRPF39-202ENST00000424478 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
PRPF39-202ENST00000424478 LMOD1P29536 600 aaPredicted RBP16■□□□□ 0.15
PRPF39-202ENST00000424478 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
PRPF39-202ENST00000424478 NACAP1Q9BZK3 213 aa16■□□□□ 0.15
PRPF39-202ENST00000424478 GNAT2P19087 354 aa16■□□□□ 0.15
PRPF39-202ENST00000424478 GGA3Q9NZ52 723 aa16■□□□□ 0.15
PRPF39-202ENST00000424478 PPARAQ07869 468 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 ZBED3Q96IU2 234 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 RRAGCQ9HB90 399 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 NMRK2Q9NPI5 230 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 NEDD4P46934 1319 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 IMMTQ16891 758 aaKnown RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
PRPF39-202ENST00000424478 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
PRPF39-202ENST00000424478 E7EWF7 191 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 PLCG2P16885 1265 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
PRPF39-202ENST00000424478 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
PRPF39-202ENST00000424478 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 MIGA2Q7L4E1 593 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 TICAM2Q86XR7 235 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 ZKSCAN3Q9BRR0 538 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 FOCADQ5VW36 1801 aa15.98■□□□□ 0.15
PRPF39-202ENST00000424478 B4E1Z4 1266 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 MCCP23508 829 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 EPHX2P34913 555 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 FMR1Q06787 632 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRPF39-202ENST00000424478 DDRGK1Q96HY6 314 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 MYO1BO43795 1136 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 RASA3Q14644 834 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
PRPF39-202ENST00000424478 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 TMOD2Q9NZR1 351 aa15.97■□□□□ 0.15
PRPF39-202ENST00000424478 LAMA4Q16363 1823 aa15.96■□□□□ 0.15
PRPF39-202ENST00000424478 ADM5C9JUS6 153 aa15.96■□□□□ 0.15
PRPF39-202ENST00000424478 ZKSCAN1P17029 563 aaPredicted RBP15.96■□□□□ 0.15
PRPF39-202ENST00000424478 PRKG1Q13976 671 aa15.96■□□□□ 0.15
PRPF39-202ENST00000424478 C12orf60Q5U649 245 aa15.96■□□□□ 0.15
PRPF39-202ENST00000424478 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
PRPF39-202ENST00000424478 CTNNA3Q9UI47 895 aa15.96■□□□□ 0.15
PRPF39-202ENST00000424478 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 ALX1Q15699 326 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 MTMR14Q8NCE2 650 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 CSRNP1Q96S65 589 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 TAF1DQ9H5J8 278 aaPredicted RBP15.95■□□□□ 0.14
PRPF39-202ENST00000424478 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.95■□□□□ 0.14
PRPF39-202ENST00000424478 NMT2O60551 498 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 NEK4P51957 841 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
PRPF39-202ENST00000424478 IDI2Q9BXS1 227 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms