RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 MKRN3Q13064 507 aaKnown RBP22.71■■□□□ 1.23
PRNP-202ENST00000424424 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 CERS3Q8IU89 383 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 TEX11Q8IYF3 940 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 MAGEB6Q8N7X4 407 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.71■■□□□ 1.23
PRNP-202ENST00000424424 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 RFX7Q2KHR2 1363 aa22.71■■□□□ 1.23
PRNP-202ENST00000424424 GOLIM4O00461 696 aa22.7■■□□□ 1.22
PRNP-202ENST00000424424 ZFPM1Q8IX07 1006 aa22.7■■□□□ 1.22
PRNP-202ENST00000424424 WNK4Q96J92 1243 aa22.7■■□□□ 1.22
PRNP-202ENST00000424424 WRNIP1Q96S55 665 aa22.7■■□□□ 1.22
PRNP-202ENST00000424424 ELP3Q9H9T3 547 aa22.7■■□□□ 1.22
PRNP-202ENST00000424424 DDX4Q9NQI0 724 aaKnown RBP22.7■■□□□ 1.22
PRNP-202ENST00000424424 CDK5RAP2Q96SN8 1893 aa22.69■■□□□ 1.22
PRNP-202ENST00000424424 HDAC1Q13547 482 aaPredicted RBP22.69■■□□□ 1.22
PRNP-202ENST00000424424 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.69■■□□□ 1.22
PRNP-202ENST00000424424 SH3RF3Q8TEJ3 882 aaPredicted RBP22.69■■□□□ 1.22
PRNP-202ENST00000424424 GCC1Q96CN9 775 aa22.69■■□□□ 1.22
PRNP-202ENST00000424424 ECHDC1Q9NTX5 307 aa22.69■■□□□ 1.22
PRNP-202ENST00000424424 PAG1Q9NWQ8 432 aa22.69■■□□□ 1.22
PRNP-202ENST00000424424 MANSC4A6NHS7 340 aaPredicted RBP22.68■■□□□ 1.22
PRNP-202ENST00000424424 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
PRNP-202ENST00000424424 LBX1P52954 281 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 INHBEP58166 350 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 VGLL4Q14135 290 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 ADGRA1Q86SQ6 560 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 HAUS7Q99871 368 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 PRDM10Q9NQV6 1147 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 SAGE1Q9NXZ1 904 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 FOCADQ5VW36 1801 aa22.68■■□□□ 1.22
PRNP-202ENST00000424424 TM4SF4P48230 202 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 SLC9C2Q5TAH2 1124 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 EXOC6Q8TAG9 804 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 OPTNQ96CV9 577 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 OSBPL5Q9H0X9 879 aaPredicted RBP22.67■■□□□ 1.22
PRNP-202ENST00000424424 LAMB1P07942 1786 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 MYH7P12883 1935 aa22.67■■□□□ 1.22
PRNP-202ENST00000424424 DDTLA6NHG4 134 aaPredicted RBP22.66■■□□□ 1.22
PRNP-202ENST00000424424 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.66■■□□□ 1.22
PRNP-202ENST00000424424 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
PRNP-202ENST00000424424 RNF186Q9NXI6 227 aa22.66■■□□□ 1.22
PRNP-202ENST00000424424 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
PRNP-202ENST00000424424 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 TRPA1O75762 1119 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 SH3BP5LQ7L8J4 393 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 MIGA1Q8NAN2 632 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 TGFBRAP1Q8WUH2 860 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 ZKSCAN4Q969J2 545 aaPredicted RBP22.65■■□□□ 1.22
PRNP-202ENST00000424424 TSKSQ9UJT2 592 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 ZNF112Q9UJU3 913 aa22.65■■□□□ 1.22
PRNP-202ENST00000424424 PDE6AP16499 860 aa22.64■■□□□ 1.21
PRNP-202ENST00000424424 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.21
PRNP-202ENST00000424424 ANKRD45Q5TZF3 282 aa22.64■■□□□ 1.21
PRNP-202ENST00000424424 ERO1BQ86YB8 467 aa22.64■■□□□ 1.21
PRNP-202ENST00000424424 EDC3Q96F86 508 aaKnown RBP22.64■■□□□ 1.21
PRNP-202ENST00000424424 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
PRNP-202ENST00000424424 SPDYE5A6NIY4 337 aa22.63■■□□□ 1.21
PRNP-202ENST00000424424 INPP5BP32019 993 aa22.63■■□□□ 1.21
PRNP-202ENST00000424424 OTUD5Q96G74 571 aa22.63■■□□□ 1.21
PRNP-202ENST00000424424 SNCAIPQ9Y6H5 919 aa22.63■■□□□ 1.21
PRNP-202ENST00000424424 MYH1P12882 1939 aa22.63■■□□□ 1.21
PRNP-202ENST00000424424 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 ZNF532Q9HCE3 1301 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 MAGEB6P1A0A0J9YX57 407 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 ERC2O15083 957 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 TBC1D12O60347 775 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 ALDH1A1P00352 501 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 GJA5P36382 358 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 USP5P45974 858 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 MAP3K10Q02779 954 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 OTUD7BQ6GQQ9 843 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 ZSCAN25Q6NSZ9 544 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 MAPKAPK5Q8IW41 473 aa22.62■■□□□ 1.21
PRNP-202ENST00000424424 FLT1P17948 1338 aa22.61■■□□□ 1.21
PRNP-202ENST00000424424 GTF2A2P52657 109 aa22.61■■□□□ 1.21
PRNP-202ENST00000424424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.61■■□□□ 1.21
PRNP-202ENST00000424424 PI4KBQ9UBF8 816 aa22.61■■□□□ 1.21
PRNP-202ENST00000424424 PPATQ06203 517 aa22.6■■□□□ 1.21
PRNP-202ENST00000424424 NOL9Q5SY16 702 aaKnown RBP22.6■■□□□ 1.21
PRNP-202ENST00000424424 CNKSR2Q8WXI2 1034 aa22.6■■□□□ 1.21
PRNP-202ENST00000424424 HERC5Q9UII4 1024 aaKnown RBP22.6■■□□□ 1.21
PRNP-202ENST00000424424 HLA-DOAP06340 250 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 ADD2P35612 726 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 PPIL2Q13356 520 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 IFNL1Q8IU54 200 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 TRIM34Q9BYJ4 488 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 CASP8AP2Q9UKL3 1982 aa22.59■■□□□ 1.21
PRNP-202ENST00000424424 DOCK1Q14185 1865 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 TCRBV5S4A2TA0A5A2 114 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 TESPA1A2RU30 521 aaPredicted RBP22.58■■□□□ 1.21
PRNP-202ENST00000424424 PHF20L1A8MW92 1017 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 CTNND1O60716 968 aaKnown RBP22.58■■□□□ 1.21
PRNP-202ENST00000424424 GLRX3O76003 335 aaKnown RBP22.58■■□□□ 1.21
PRNP-202ENST00000424424 MX1P20591 662 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 TSHZ3Q63HK5 1081 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 SCYL3Q8IZE3 742 aa22.58■■□□□ 1.21
PRNP-202ENST00000424424 RIOK1Q9BRS2 568 aaKnown RBP22.58■■□□□ 1.21
PRNP-202ENST00000424424 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.21
PRNP-202ENST00000424424 PICK1Q9NRD5 415 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms