RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 FAM198AQ9UFP1 575 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
HERC3-204ENST00000422770 MYH8P13535 1937 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 DOCK1Q14185 1865 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 MAP4K4O95819 1239 aaPredicted RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 ATP5JP18859 108 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 DYNLL1P63167 89 aaKnown RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 MAPKAPK5Q8IW41 473 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 ANKRD13AQ8IZ07 590 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.72□□□□□ -0.53
HERC3-204ENST00000422770 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
HERC3-204ENST00000422770 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
HERC3-204ENST00000422770 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
HERC3-204ENST00000422770 BAZ2AQ9UIF9 1905 aaKnown RBP11.71□□□□□ -0.53
HERC3-204ENST00000422770 ERC2O15083 957 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 FOXN1O15353 648 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 ENTPD3O75355 529 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 PDE6AP16499 860 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 USP5P45974 858 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 RHBDL3P58872 404 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 HDAC1Q13547 482 aaPredicted RBP11.71□□□□□ -0.53
HERC3-204ENST00000422770 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
HERC3-204ENST00000422770 OTUD7AQ8TE49 926 aaPredicted RBP11.71□□□□□ -0.53
HERC3-204ENST00000422770 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 HAUS7Q99871 368 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.53
HERC3-204ENST00000422770 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.53
HERC3-204ENST00000422770 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 MAGEB6P1A0A0J9YX57 407 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
HERC3-204ENST00000422770 MX1P20591 662 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
HERC3-204ENST00000422770 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 VGLL4Q14135 290 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
HERC3-204ENST00000422770 OPTNQ96CV9 577 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
HERC3-204ENST00000422770 LAMB1P07942 1786 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 FLT1P17948 1338 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 IGHDP01880 384 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 SPRYD7Q5W111 196 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 ZSCAN25Q6NSZ9 544 aa11.69□□□□□ -0.54
HERC3-204ENST00000422770 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
HERC3-204ENST00000422770 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
HERC3-204ENST00000422770 OSBPL5Q9H0X9 879 aaPredicted RBP11.69□□□□□ -0.54
HERC3-204ENST00000422770 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.69□□□□□ -0.54
HERC3-204ENST00000422770 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 TRPA1O75762 1119 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 INPP5BP32019 993 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 LBX1P52954 281 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.68□□□□□ -0.54
HERC3-204ENST00000422770 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 CERS3Q8IU89 383 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 CRNKL1Q9BZJ0 848 aaKnown RBP11.68□□□□□ -0.54
HERC3-204ENST00000422770 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
HERC3-204ENST00000422770 DDX60LQ5H9U9 1706 aaKnown RBP11.67□□□□□ -0.54
HERC3-204ENST00000422770 IGSF3O75054 1194 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 GLRX3O76003 335 aaKnown RBP11.67□□□□□ -0.54
HERC3-204ENST00000422770 MBD4O95243 580 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 HLA-DOAP06340 250 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 SLURP2P0DP57 97 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
HERC3-204ENST00000422770 ADD2P35612 726 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 PPP4CP60510 307 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 PICK1Q9NRD5 415 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
HERC3-204ENST00000422770 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 MANSC4A6NHS7 340 aaPredicted RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 CA12O43570 354 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 POLR3DP05423 398 aaPredicted RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 HSPA8P11142 646 aaKnown RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 GJA5P36382 358 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
HERC3-204ENST00000422770 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
HERC3-204ENST00000422770 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms