RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GPR75-ASB3A0A0A6YYF3 556 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 RAB11FIP3O75154 756 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 RGS3P49796 1198 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 VGLL4Q14135 290 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 OTUD7BQ6GQQ9 843 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.77■■□□□ 1.88
TRAF4-204ENST00000422344 ZNF341Q9BYN7 854 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 BCL11AQ9H165 835 aa26.77■■□□□ 1.88
TRAF4-204ENST00000422344 ENTPD3O75355 529 aa26.76■■□□□ 1.87
TRAF4-204ENST00000422344 ZAP70P43403 619 aa26.76■■□□□ 1.87
TRAF4-204ENST00000422344 MIGA2Q7L4E1 593 aa26.76■■□□□ 1.87
TRAF4-204ENST00000422344 ZSCAN29Q8IWY8 852 aaPredicted RBP26.76■■□□□ 1.87
TRAF4-204ENST00000422344 ZNF384Q8TF68 577 aa26.76■■□□□ 1.87
TRAF4-204ENST00000422344 OPTNQ96CV9 577 aa26.76■■□□□ 1.87
TRAF4-204ENST00000422344 CYP2E1P05181 493 aaPredicted RBP26.75■■□□□ 1.87
TRAF4-204ENST00000422344 CRHR2Q13324 411 aa26.75■■□□□ 1.87
TRAF4-204ENST00000422344 PICALMQ13492 652 aa26.75■■□□□ 1.87
TRAF4-204ENST00000422344 NAA16Q6N069 864 aaPredicted RBP26.75■■□□□ 1.87
TRAF4-204ENST00000422344 CD99L2Q8TCZ2 262 aa26.75■■□□□ 1.87
TRAF4-204ENST00000422344 ERO1AQ96HE7 468 aa26.75■■□□□ 1.87
TRAF4-204ENST00000422344 AK9Q5TCS8 1911 aa26.75■■□□□ 1.87
TRAF4-204ENST00000422344 MAST2Q6P0Q8 1798 aa26.74■■□□□ 1.87
TRAF4-204ENST00000422344 MAP4K4O95819 1239 aaPredicted RBP26.74■■□□□ 1.87
TRAF4-204ENST00000422344 IFIT2P09913 472 aaKnown RBP26.74■■□□□ 1.87
TRAF4-204ENST00000422344 PTPN18Q99952 460 aa26.74■■□□□ 1.87
TRAF4-204ENST00000422344 CENPFP49454 3210 aa26.74■■□□□ 1.87
TRAF4-204ENST00000422344 IGSF3O75054 1194 aa26.73■■□□□ 1.87
TRAF4-204ENST00000422344 WDHD1O75717 1129 aaPredicted RBP26.73■■□□□ 1.87
TRAF4-204ENST00000422344 ZFPM1Q8IX07 1006 aa26.73■■□□□ 1.87
TRAF4-204ENST00000422344 RFX7Q2KHR2 1363 aa26.72■■□□□ 1.87
TRAF4-204ENST00000422344 BAG3O95817 575 aa26.72■■□□□ 1.87
TRAF4-204ENST00000422344 RRP1P56182 461 aaKnown RBP26.72■■□□□ 1.87
TRAF4-204ENST00000422344 ZKSCAN4Q969J2 545 aaPredicted RBP26.72■■□□□ 1.87
TRAF4-204ENST00000422344 OTUD5Q96G74 571 aa26.72■■□□□ 1.87
TRAF4-204ENST00000422344 PIH1D3Q9NQM4 214 aaKnown RBP26.72■■□□□ 1.87
TRAF4-204ENST00000422344 PTPN22Q9Y2R2 807 aa26.72■■□□□ 1.87
TRAF4-204ENST00000422344 KIAA0100Q14667 2235 aaKnown RBP26.71■■□□□ 1.87
TRAF4-204ENST00000422344 MKI67P46013 3256 aaKnown RBP26.71■■□□□ 1.87
TRAF4-204ENST00000422344 POTEFA5A3E0 1075 aa26.71■■□□□ 1.87
TRAF4-204ENST00000422344 RHBDL3P58872 404 aa26.71■■□□□ 1.87
TRAF4-204ENST00000422344 TESPA1A2RU30 521 aaPredicted RBP26.7■■□□□ 1.86
TRAF4-204ENST00000422344 IDH1O75874 414 aaKnown RBP26.7■■□□□ 1.86
TRAF4-204ENST00000422344 ERO1BQ86YB8 467 aa26.7■■□□□ 1.86
TRAF4-204ENST00000422344 TEX11Q8IYF3 940 aa26.7■■□□□ 1.86
TRAF4-204ENST00000422344 CNKSR2Q8WXI2 1034 aa26.7■■□□□ 1.86
TRAF4-204ENST00000422344 EFCC1Q9HA90 598 aa26.7■■□□□ 1.86
TRAF4-204ENST00000422344 DDX4Q9NQI0 724 aaKnown RBP26.7■■□□□ 1.86
TRAF4-204ENST00000422344 SNCAIPQ9Y6H5 919 aa26.7■■□□□ 1.86
TRAF4-204ENST00000422344 DOCK2Q92608 1830 aa26.69■■□□□ 1.86
TRAF4-204ENST00000422344 SPDYE5A6NIY4 337 aa26.69■■□□□ 1.86
TRAF4-204ENST00000422344 PLCG2P16885 1265 aa26.69■■□□□ 1.86
TRAF4-204ENST00000422344 SP3Q02447 781 aa26.69■■□□□ 1.86
TRAF4-204ENST00000422344 NPM3O75607 178 aaKnown RBP26.68■■□□□ 1.86
TRAF4-204ENST00000422344 INPP5BP32019 993 aa26.68■■□□□ 1.86
TRAF4-204ENST00000422344 GTF2A2P52657 109 aa26.68■■□□□ 1.86
TRAF4-204ENST00000422344 AATFQ9NY61 560 aaKnown RBP eCLIP26.68■■□□□ 1.86
TRAF4-204ENST00000422344 SH3RF3Q8TEJ3 882 aaPredicted RBP26.67■■□□□ 1.86
TRAF4-204ENST00000422344 MS4A4AQ96JQ5 239 aa26.67■■□□□ 1.86
TRAF4-204ENST00000422344 LRRCC1Q9C099 1032 aa26.67■■□□□ 1.86
TRAF4-204ENST00000422344 ZNF112Q9UJU3 913 aa26.67■■□□□ 1.86
TRAF4-204ENST00000422344 NDUFB9Q9Y6M9 179 aa26.67■■□□□ 1.86
TRAF4-204ENST00000422344 DDTLA6NHG4 134 aaPredicted RBP26.66■■□□□ 1.86
TRAF4-204ENST00000422344 CYP7A1P22680 504 aa26.66■■□□□ 1.86
TRAF4-204ENST00000422344 CAP1Q01518 475 aa26.66■■□□□ 1.86
TRAF4-204ENST00000422344 MAP3K12Q12852 859 aa26.66■■□□□ 1.86
TRAF4-204ENST00000422344 TTF1Q15361 905 aaPredicted RBP26.66■■□□□ 1.86
TRAF4-204ENST00000422344 SH3BP5LQ7L8J4 393 aa26.66■■□□□ 1.86
TRAF4-204ENST00000422344 CCL15-CCL14A0A0B4J2E2 113 aa26.65■■□□□ 1.86
TRAF4-204ENST00000422344 CCL15Q16663 113 aa26.65■■□□□ 1.86
TRAF4-204ENST00000422344 BRI3BPQ8WY22 251 aa26.65■■□□□ 1.86
TRAF4-204ENST00000422344 ATRNL1Q5VV63 1379 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 PPP4CP60510 307 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 PPATQ06203 517 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 PPIL2Q13356 520 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 ADGRA1Q86SQ6 560 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 MAGEB6Q8N7X4 407 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.64■■□□□ 1.86
TRAF4-204ENST00000422344 ARMC5Q96C12 935 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 DNAJC2Q99543 621 aaKnown RBP26.64■■□□□ 1.86
TRAF4-204ENST00000422344 OSBPL5Q9H0X9 879 aaPredicted RBP26.64■■□□□ 1.86
TRAF4-204ENST00000422344 ANTXR1Q9H6X2 564 aa26.64■■□□□ 1.86
TRAF4-204ENST00000422344 CETPP11597 493 aa26.63■■□□□ 1.85
TRAF4-204ENST00000422344 SNAPC2Q13487 334 aa26.63■■□□□ 1.85
TRAF4-204ENST00000422344 TAF1CQ15572 869 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-204ENST00000422344 NOL9Q5SY16 702 aaKnown RBP26.63■■□□□ 1.85
TRAF4-204ENST00000422344 TMED8Q6PL24 325 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-204ENST00000422344 GCC1Q96CN9 775 aa26.63■■□□□ 1.85
TRAF4-204ENST00000422344 MYO5AQ9Y4I1 1855 aaKnown RBP26.63■■□□□ 1.85
TRAF4-204ENST00000422344 COL2A1P02458 1487 aaPredicted RBP26.62■■□□□ 1.85
TRAF4-204ENST00000422344 RBBP6Q7Z6E9 1792 aaKnown RBP26.62■■□□□ 1.85
TRAF4-204ENST00000422344 ZFYVE28Q9HCC9 887 aa26.62■■□□□ 1.85
TRAF4-204ENST00000422344 PICK1Q9NRD5 415 aa26.62■■□□□ 1.85
TRAF4-204ENST00000422344 IRF6O14896 467 aa26.61■■□□□ 1.85
TRAF4-204ENST00000422344 EN2P19622 333 aaPredicted RBP26.61■■□□□ 1.85
TRAF4-204ENST00000422344 CERS3Q8IU89 383 aa26.61■■□□□ 1.85
TRAF4-204ENST00000422344 BRCA2P51587 3418 aa26.61■■□□□ 1.85
TRAF4-204ENST00000422344 GOLIM4O00461 696 aa26.6■■□□□ 1.85
TRAF4-204ENST00000422344 SMARCA5O60264 1052 aaPredicted RBP26.6■■□□□ 1.85
TRAF4-204ENST00000422344 SCYL3Q8IZE3 742 aa26.6■■□□□ 1.85
TRAF4-204ENST00000422344 FAM43AQ8N2R8 423 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms