RNA–Protein interactions for RNA: ENST00000421012.1

MDH1-204, Transcript of malate dehydrogenase 1, humanhuman

TSL 4

Gene MDH1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-204ENST00000421012 PPP4R2Q9NY27 417 aa4.89□□□□□ -1.63
MDH1-204ENST00000421012 LEMD3Q9Y2U8 911 aa4.89□□□□□ -1.63
MDH1-204ENST00000421012 CYP26A1O43174 497 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 CTSHP09668 335 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 FAM87AP0C7U9 286 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 MAP7Q14244 749 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 MEI1Q5TIA1 1274 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 PCNX4Q63HM2 1172 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 FBXO33Q7Z6M2 555 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 SMYD4Q8IYR2 804 aaPredicted RBP4.88□□□□□ -1.63
MDH1-204ENST00000421012 GAL3ST3Q96A11 431 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 LRRC4CQ9HCJ2 640 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 ATG3Q9NT62 314 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 CCDC39Q9UFE4 941 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 PCDHB5Q9Y5E4 795 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 CNTNAP4Q9C0A0 1308 aa4.88□□□□□ -1.63
MDH1-204ENST00000421012 EIF4EBP3O60516 100 aaPredicted RBP4.87□□□□□ -1.63
MDH1-204ENST00000421012 RNGTTO60942 597 aaKnown RBP4.87□□□□□ -1.63
MDH1-204ENST00000421012 SLFN14P0C7P3 912 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 PDIA4P13667 645 aaKnown RBP4.87□□□□□ -1.63
MDH1-204ENST00000421012 GNA15P30679 374 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 HP1BP3Q5SSJ5 553 aaPredicted RBP4.87□□□□□ -1.63
MDH1-204ENST00000421012 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 INTS5Q6P9B9 1019 aaKnown RBP4.87□□□□□ -1.63
MDH1-204ENST00000421012 OGFOD3Q6PK18 319 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 FAM181AQ8N9Y4 354 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 ANKRD24Q8TF21 1146 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 SRCIN1Q9C0H9 1055 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 ATXN3LQ9H3M9 355 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 ZFYVE1Q9HBF4 777 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 FAM8A1Q9UBU6 413 aa4.87□□□□□ -1.63
MDH1-204ENST00000421012 PRPF40AO75400 957 aaKnown RBP4.86□□□□□ -1.63
MDH1-204ENST00000421012 GRIK1P39086 918 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 CD96P40200 585 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 ERVK-24P63145 666 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 BNIP3Q12983 259 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
MDH1-204ENST00000421012 FAM214BQ7L5A3 538 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 SPRED2Q7Z698 418 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 RNF214Q8ND24 703 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 HEXIM2Q96MH2 286 aaKnown RBP4.86□□□□□ -1.63
MDH1-204ENST00000421012 DUSP23Q9BVJ7 150 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 YIPF2Q9BWQ6 316 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 FBRSQ9HAH7 460 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 PARP2Q9UGN5 583 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 PPM1HQ9ULR3 514 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 SPG7Q9UQ90 795 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 AK5Q9Y6K8 562 aa4.86□□□□□ -1.63
MDH1-204ENST00000421012 F6X3S4 739 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 GIPC1O14908 333 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 TRIM37O94972 964 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 WNT11O96014 354 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 PRNPP04156 253 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 ATP2B2Q01814 1243 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 MAP3K11Q16584 847 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 LLGL2Q6P1M3 1020 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 PLD6Q8N2A8 252 aaKnown RBP4.85□□□□□ -1.63
MDH1-204ENST00000421012 ACSBG1Q96GR2 724 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 METTL22Q9BUU2 404 aaPredicted RBP4.85□□□□□ -1.63
MDH1-204ENST00000421012 CEP44Q9C0F1 390 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 GZF1Q9H116 711 aaPredicted RBP4.85□□□□□ -1.63
MDH1-204ENST00000421012 PIDD1Q9HB75 910 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 ADGRE2Q9UHX3 823 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 PCDHA4Q9UN74 947 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 TTF2Q9UNY4 1162 aaKnown RBP4.85□□□□□ -1.63
MDH1-204ENST00000421012 PLAGL2Q9UPG8 496 aa4.85□□□□□ -1.63
MDH1-204ENST00000421012 TAL1P17542 331 aaPredicted RBP4.84□□□□□ -1.63
MDH1-204ENST00000421012 EIF4BP23588 611 aaKnown RBP4.84□□□□□ -1.63
MDH1-204ENST00000421012 DAB2P98082 770 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 SEPT6Q14141 434 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 NKG7Q16617 165 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 EAPPQ56P03 285 aaPredicted RBP4.84□□□□□ -1.63
MDH1-204ENST00000421012 ZBTB37Q5TC79 503 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 MCTP1Q6DN14 999 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 TOP6BLQ8N6T0 577 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 PLPPR2Q96GM1 343 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 EMILIN2Q9BXX0 1053 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 PAK6Q9NQU5 681 aaPredicted RBP4.84□□□□□ -1.63
MDH1-204ENST00000421012 PCOLCE2Q9UKZ9 415 aa4.84□□□□□ -1.63
MDH1-204ENST00000421012 OXCT1P55809 520 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 DUSP27Q5VZP5 1158 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 TTBK2Q6IQ55 1244 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 SV2BQ7L1I2 683 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 CYFIP1Q7L576 1253 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.83□□□□□ -1.64
MDH1-204ENST00000421012 GIMAP7Q8NHV1 300 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 RIN3Q8TB24 985 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 BCL7CQ8WUZ0 217 aaPredicted RBP4.83□□□□□ -1.64
MDH1-204ENST00000421012 CYP8B1Q9UNU6 501 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 TLR6Q9Y2C9 796 aa4.83□□□□□ -1.64
MDH1-204ENST00000421012 COL17A1Q9UMD9 1497 aaPredicted RBP4.82□□□□□ -1.64
MDH1-204ENST00000421012 GFRA2O00451 464 aa4.82□□□□□ -1.64
MDH1-204ENST00000421012 EOMESO95936 686 aa4.82□□□□□ -1.64
MDH1-204ENST00000421012 TFE3P19532 575 aaPredicted RBP4.82□□□□□ -1.64
MDH1-204ENST00000421012 SLBPQ14493 270 aaKnown RBP eCLIP4.82□□□□□ -1.64
MDH1-204ENST00000421012 CCDC85BQ15834 202 aaPredicted RBP4.82□□□□□ -1.64
MDH1-204ENST00000421012 CPSF6Q16630 551 aaKnown RBP eCLIP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms