RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 ZNF341Q9BYN7 854 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 ATAD5Q96QE3 1844 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 GPR75-ASB3A0A0A6YYF3 556 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 CCL15-CCL14A0A0B4J2E2 113 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 IRF6O14896 467 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 ENTPD3O75355 529 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 BTDP43251 543 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 GTF2A2P52657 109 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 MAP3K10Q02779 954 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 PPIL2Q13356 520 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 PKN2Q16513 984 aaKnown RBP13.61□□□□□ -0.23
SSBP3-206ENST00000420121 CCL15Q16663 113 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
SSBP3-206ENST00000420121 FAM43AQ8N2R8 423 aa13.61□□□□□ -0.23
SSBP3-206ENST00000420121 DDTLA6NHG4 134 aaPredicted RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 PHF20L1A8MW92 1017 aa13.6□□□□□ -0.23
SSBP3-206ENST00000420121 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 CENPFP49454 3210 aa13.6□□□□□ -0.23
SSBP3-206ENST00000420121 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
SSBP3-206ENST00000420121 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 DBNLQ9UJU6 430 aaKnown RBP13.6□□□□□ -0.23
SSBP3-206ENST00000420121 RBBP6Q7Z6E9 1792 aaKnown RBP13.59□□□□□ -0.23
SSBP3-206ENST00000420121 UQCRFS1P1P0C7P4 283 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 PPATQ06203 517 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 MOGSQ13724 837 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 GORABQ5T7V8 394 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 EAF2Q96CJ1 260 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-206ENST00000420121 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-206ENST00000420121 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 KCNH4Q9UQ05 1017 aa13.59□□□□□ -0.23
SSBP3-206ENST00000420121 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-206ENST00000420121 BTBD19C9JJ37 291 aa13.58□□□□□ -0.24
SSBP3-206ENST00000420121 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
SSBP3-206ENST00000420121 SOX10P56693 466 aa13.58□□□□□ -0.24
SSBP3-206ENST00000420121 CD99L2Q8TCZ2 262 aa13.58□□□□□ -0.24
SSBP3-206ENST00000420121 CETPP11597 493 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 SP3Q02447 781 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-206ENST00000420121 SNAPC2Q13487 334 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 PICALMQ13492 652 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-206ENST00000420121 ADGRA1Q86SQ6 560 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-206ENST00000420121 CCDC8Q9H0W5 538 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-206ENST00000420121 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 MGAMO43451 1857 aa13.57□□□□□ -0.24
SSBP3-206ENST00000420121 LDHCP07864 332 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 ZAP70P43403 619 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 GSTO1P78417 241 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
SSBP3-206ENST00000420121 TTC39AQ5SRH9 613 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 SIRT2Q8IXJ6 389 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 ZCCHC17Q9NP64 241 aaKnown RBP13.56□□□□□ -0.24
SSBP3-206ENST00000420121 PIH1D3Q9NQM4 214 aaKnown RBP13.56□□□□□ -0.24
SSBP3-206ENST00000420121 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 ADGRA2Q96PE1 1338 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 MYH1P12882 1939 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 PDE4DIPQ5VU43 2346 aa13.56□□□□□ -0.24
SSBP3-206ENST00000420121 LOC285556D6RIA3 1793 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 TLR2O60603 784 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 MAP4K4O95819 1239 aaPredicted RBP13.55□□□□□ -0.24
SSBP3-206ENST00000420121 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 OSBPL5Q9H0X9 879 aaPredicted RBP13.55□□□□□ -0.24
SSBP3-206ENST00000420121 ZFYVE28Q9HCC9 887 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 ZBTB40Q9NUA8 1239 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
SSBP3-206ENST00000420121 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 BRCA2P51587 3418 aa13.55□□□□□ -0.24
SSBP3-206ENST00000420121 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
SSBP3-206ENST00000420121 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 TBC1D12O60347 775 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 PPP4CP60510 307 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
SSBP3-206ENST00000420121 GPAT2Q6NUI2 795 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 ANKRD23Q86SG2 305 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 ZSCAN29Q8IWY8 852 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-206ENST00000420121 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
SSBP3-206ENST00000420121 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
SSBP3-206ENST00000420121 KIAA0100Q14667 2235 aaKnown RBP13.54□□□□□ -0.24
SSBP3-206ENST00000420121 CXCL11O14625 94 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 MS4A1P11836 297 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 PTPRAP18433 802 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
SSBP3-206ENST00000420121 C17orf99Q6UX52 265 aa13.53□□□□□ -0.24
SSBP3-206ENST00000420121 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms