RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 GAKO14976 1311 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 DDTLA6NHG4 134 aaPredicted RBP17.78■□□□□ 0.44
NFE4-201ENST00000420058 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
NFE4-201ENST00000420058 CIAO1O76071 339 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 SGPL1O95470 568 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 ADORA1P30542 326 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 FCGRTP55899 365 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 ATP2B3Q16720 1220 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 SIL1Q9H173 461 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
NFE4-201ENST00000420058 BIN2Q9UBW5 565 aaPredicted RBP17.78■□□□□ 0.44
NFE4-201ENST00000420058 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
NFE4-201ENST00000420058 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.44
NFE4-201ENST00000420058 ENTPD3O75355 529 aa17.77■□□□□ 0.44
NFE4-201ENST00000420058 FLT3LGP49771 235 aa17.77■□□□□ 0.44
NFE4-201ENST00000420058 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.44
NFE4-201ENST00000420058 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
NFE4-201ENST00000420058 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
NFE4-201ENST00000420058 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
NFE4-201ENST00000420058 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.77■□□□□ 0.44
NFE4-201ENST00000420058 SEMA3EO15041 775 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 ADCY3O60266 1144 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 ELNP15502 786 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
NFE4-201ENST00000420058 UBXN2AP68543 259 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 HTATIP2Q9BUP3 242 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 GNL3LQ9NVN8 582 aaKnown RBP17.76■□□□□ 0.43
NFE4-201ENST00000420058 DENND2AQ9ULE3 1009 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 PA2G4Q9UQ80 394 aaKnown RBP17.76■□□□□ 0.43
NFE4-201ENST00000420058 SLC45A1Q9Y2W3 748 aa17.76■□□□□ 0.43
NFE4-201ENST00000420058 FARP2O94887 1054 aaPredicted RBP17.75■□□□□ 0.43
NFE4-201ENST00000420058 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
NFE4-201ENST00000420058 IRF5Q13568 498 aa17.75■□□□□ 0.43
NFE4-201ENST00000420058 CCDC102BQ68D86 513 aa17.75■□□□□ 0.43
NFE4-201ENST00000420058 CCDC84Q86UT8 332 aaPredicted RBP17.75■□□□□ 0.43
NFE4-201ENST00000420058 PXYLP1Q8TE99 480 aa17.75■□□□□ 0.43
NFE4-201ENST00000420058 MGAMO43451 1857 aa17.75■□□□□ 0.43
NFE4-201ENST00000420058 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
NFE4-201ENST00000420058 INHAP05111 366 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 TIMM10P62072 90 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 RASGRF1Q13972 1273 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 GADL1Q6ZQY3 521 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 CRISPLD2Q9H0B8 497 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
NFE4-201ENST00000420058 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
NFE4-201ENST00000420058 MYH13Q9UKX3 1938 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 E9PSI1 815 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 SOX1O00570 391 aaPredicted RBP17.73■□□□□ 0.43
NFE4-201ENST00000420058 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
NFE4-201ENST00000420058 RHBDL3P58872 404 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 NR2E3Q9Y5X4 410 aa17.73■□□□□ 0.43
NFE4-201ENST00000420058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
NFE4-201ENST00000420058 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
NFE4-201ENST00000420058 TREML2Q5T2D2 321 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 DEFB118Q96PH6 123 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
NFE4-201ENST00000420058 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
NFE4-201ENST00000420058 PTPRFP10586 1907 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 TBC1D12O60347 775 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
NFE4-201ENST00000420058 BTDP43251 543 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 ZSCAN29Q8IWY8 852 aaPredicted RBP17.71■□□□□ 0.43
NFE4-201ENST00000420058 TRMT2AQ8IZ69 625 aaKnown RBP17.71■□□□□ 0.43
NFE4-201ENST00000420058 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 AGTPBP1Q9UPW5 1226 aa17.71■□□□□ 0.43
NFE4-201ENST00000420058 LAMA2P24043 3122 aaKnown RBP17.71■□□□□ 0.43
NFE4-201ENST00000420058 PDS5AQ29RF7 1337 aaKnown RBP17.71■□□□□ 0.42
NFE4-201ENST00000420058 TNPO2O14787 897 aaKnown RBP17.7■□□□□ 0.42
NFE4-201ENST00000420058 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
NFE4-201ENST00000420058 ZGPATQ8N5A5 531 aaKnown RBP17.7■□□□□ 0.42
NFE4-201ENST00000420058 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
NFE4-201ENST00000420058 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
NFE4-201ENST00000420058 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
NFE4-201ENST00000420058 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
NFE4-201ENST00000420058 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
NFE4-201ENST00000420058 MNX1P50219 401 aaPredicted RBP17.69■□□□□ 0.42
NFE4-201ENST00000420058 MECOMQ03112 1051 aa17.69■□□□□ 0.42
NFE4-201ENST00000420058 PICALMQ13492 652 aa17.69■□□□□ 0.42
NFE4-201ENST00000420058 DIS3LQ8TF46 1054 aaKnown RBP17.69■□□□□ 0.42
NFE4-201ENST00000420058 PAWRQ96IZ0 340 aaKnown RBP17.69■□□□□ 0.42
NFE4-201ENST00000420058 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
NFE4-201ENST00000420058 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
NFE4-201ENST00000420058 DNAH12Q6ZR08 3092 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 A0A1W2PPC1 479 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 EVI5O60447 810 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 CAPN2P17655 700 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 FAM110CQ1W6H9 321 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
NFE4-201ENST00000420058 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
NFE4-201ENST00000420058 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
NFE4-201ENST00000420058 LRCH3Q96II8 777 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms