RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 KAT6BQ8WYB5 2073 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 NWD2Q9ULI1 1742 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 H2AFXP16104 143 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 ADKP55263 362 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 GNG11P61952 73 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 ARGLU1Q9NWB6 273 aaPredicted RBP17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 PHKA1P46020 1223 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 GRAMD1CQ8IYS0 662 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 UBN2Q6ZU65 1347 aa17.42■□□□□ 0.38
SEMA3B-203ENST00000419007 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 ZSCAN12O43309 604 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 CUTAO60888 179 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 KCNJ6P48051 423 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 GRIN1Q05586 938 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 NOL10Q9BSC4 688 aaKnown RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 KIF1AQ12756 1690 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 PDE6AP16499 860 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 TRIM65Q6PJ69 517 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 NAPBQ9H115 298 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 PPP2R2CQ9Y2T4 447 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 NFE2L3Q9Y4A8 694 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 DCCP43146 1447 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 POLR3GO15318 223 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 BAG1Q99933 345 aaPredicted RBP17.41■□□□□ 0.38
SEMA3B-203ENST00000419007 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 ANKRD18BA2A2Z9 1011 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 SEC31AO94979 1220 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 BMP6P22004 513 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 REXO1L1PQ8IX06 675 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 PHLPP2Q6ZVD8 1323 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 FANCGO15287 622 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 IGDCC4Q8TDY8 1250 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 LY9Q9HBG7 655 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 WDR19Q8NEZ3 1342 aa17.4■□□□□ 0.38
SEMA3B-203ENST00000419007 SNAP23O00161 211 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 TEX35Q5T0J7 233 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 DESI2Q9BSY9 194 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 FBXO3Q9UK99 471 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 FHOD1Q9Y613 1164 aa17.39■□□□□ 0.38
SEMA3B-203ENST00000419007 TUBB4AP04350 444 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 NTRK3Q16288 839 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 HLFQ16534 295 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 INTS13Q9NVM9 706 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 SERTAD1Q9UHV2 236 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 MBD4O95243 580 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 CASQ1P31415 396 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 POSTNQ15063 836 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 ASAP1Q9ULH1 1129 aa17.39■□□□□ 0.37
SEMA3B-203ENST00000419007 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 MAGEB6Q8N7X4 407 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 WDR24Q96S15 920 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 TRMT112Q9UI30 125 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 MAN1B1Q9UKM7 699 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 CSF1RP07333 972 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 NR5A1Q13285 461 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 TOGARAM2Q6ZUX3 1019 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 SMARCE1Q969G3 411 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 ZSWIM4Q9H7M6 989 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 CPLX3Q8WVH0 158 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
SEMA3B-203ENST00000419007 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 IL2RBP14784 551 aa17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 UBE3CQ15386 1083 aa17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 ZBTB9Q96C00 473 aa17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 TJP1Q07157 1748 aa17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 TDO2P48775 406 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms