RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZAP70P43403 619 aa20.16■□□□□ 0.82
LINC00404-201ENST00000418660 GTF2A2P52657 109 aa20.16■□□□□ 0.82
LINC00404-201ENST00000418660 AACSQ86V21 672 aa20.16■□□□□ 0.82
LINC00404-201ENST00000418660 ZNF296Q8WUU4 475 aaPredicted RBP20.16■□□□□ 0.82
LINC00404-201ENST00000418660 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
LINC00404-201ENST00000418660 INPP5BP32019 993 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 PICALMQ13492 652 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 SH3BP5LQ7L8J4 393 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
LINC00404-201ENST00000418660 KIF1BPQ96EK5 621 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 PTPN18Q99952 460 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 IL1RAPL2Q9NP60 686 aa20.15■□□□□ 0.82
LINC00404-201ENST00000418660 DDX4Q9NQI0 724 aaKnown RBP20.15■□□□□ 0.82
LINC00404-201ENST00000418660 ATRNL1Q5VV63 1379 aa20.14■□□□□ 0.81
LINC00404-201ENST00000418660 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
LINC00404-201ENST00000418660 NAA16Q6N069 864 aaPredicted RBP20.14■□□□□ 0.81
LINC00404-201ENST00000418660 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
LINC00404-201ENST00000418660 CCL15-CCL14A0A0B4J2E2 113 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 DDTLA6NHG4 134 aaPredicted RBP20.13■□□□□ 0.81
LINC00404-201ENST00000418660 MAP3K10Q02779 954 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 PPATQ06203 517 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 PPIL2Q13356 520 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 CCL15Q16663 113 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 CLASRPQ8N2M8 674 aaKnown RBP20.13■□□□□ 0.81
LINC00404-201ENST00000418660 BRI3BPQ8WY22 251 aa20.13■□□□□ 0.81
LINC00404-201ENST00000418660 NOL10Q9BSC4 688 aaKnown RBP20.13■□□□□ 0.81
LINC00404-201ENST00000418660 PIH1D3Q9NQM4 214 aaKnown RBP20.13■□□□□ 0.81
LINC00404-201ENST00000418660 APBB1O00213 710 aa20.12■□□□□ 0.81
LINC00404-201ENST00000418660 FKTNO75072 461 aa20.12■□□□□ 0.81
LINC00404-201ENST00000418660 BAG3O95817 575 aa20.12■□□□□ 0.81
LINC00404-201ENST00000418660 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
LINC00404-201ENST00000418660 PHF20L1A8MW92 1017 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 IRF6O14896 467 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 CETPP11597 493 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 PPP4CP60510 307 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 SNAPC2Q13487 334 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 TEX11Q8IYF3 940 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 AK9Q5TCS8 1911 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
LINC00404-201ENST00000418660 PLCG2P16885 1265 aa20.1■□□□□ 0.81
LINC00404-201ENST00000418660 CRHR2Q13324 411 aa20.1■□□□□ 0.81
LINC00404-201ENST00000418660 SH3RF3Q8TEJ3 882 aaPredicted RBP20.1■□□□□ 0.81
LINC00404-201ENST00000418660 AATFQ9NY61 560 aaKnown RBP eCLIP20.1■□□□□ 0.81
LINC00404-201ENST00000418660 DOCK2Q92608 1830 aa20.1■□□□□ 0.81
LINC00404-201ENST00000418660 CCDC85CA6NKD9 419 aa20.09■□□□□ 0.81
LINC00404-201ENST00000418660 TBC1D12O60347 775 aa20.09■□□□□ 0.81
LINC00404-201ENST00000418660 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
LINC00404-201ENST00000418660 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
LINC00404-201ENST00000418660 PKN2Q16513 984 aaKnown RBP20.09■□□□□ 0.81
LINC00404-201ENST00000418660 ADGRA1Q86SQ6 560 aa20.09■□□□□ 0.81
LINC00404-201ENST00000418660 OSBPL5Q9H0X9 879 aaPredicted RBP20.09■□□□□ 0.81
LINC00404-201ENST00000418660 COL2A1P02458 1487 aaPredicted RBP20.09■□□□□ 0.81
LINC00404-201ENST00000418660 SCYL3Q8IZE3 742 aa20.08■□□□□ 0.81
LINC00404-201ENST00000418660 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.81
LINC00404-201ENST00000418660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.08■□□□□ 0.81
LINC00404-201ENST00000418660 ANTXR1Q9H6X2 564 aa20.08■□□□□ 0.81
LINC00404-201ENST00000418660 ZCCHC17Q9NP64 241 aaKnown RBP20.08■□□□□ 0.81
LINC00404-201ENST00000418660 KCNH4Q9UQ05 1017 aa20.08■□□□□ 0.81
LINC00404-201ENST00000418660 NDUFB9Q9Y6M9 179 aa20.08■□□□□ 0.81
LINC00404-201ENST00000418660 CYP7A1P22680 504 aa20.07■□□□□ 0.8
LINC00404-201ENST00000418660 MAP3K12Q12852 859 aa20.07■□□□□ 0.8
LINC00404-201ENST00000418660 TMED8Q6PL24 325 aaPredicted RBP20.07■□□□□ 0.8
LINC00404-201ENST00000418660 ZFYVE28Q9HCC9 887 aa20.07■□□□□ 0.8
LINC00404-201ENST00000418660 PICK1Q9NRD5 415 aa20.07■□□□□ 0.8
LINC00404-201ENST00000418660 CTNND1O60716 968 aaKnown RBP20.06■□□□□ 0.8
LINC00404-201ENST00000418660 SLURP2P0DP57 97 aa20.06■□□□□ 0.8
LINC00404-201ENST00000418660 TTF1Q15361 905 aaPredicted RBP20.06■□□□□ 0.8
LINC00404-201ENST00000418660 TAF1CQ15572 869 aaPredicted RBP20.06■□□□□ 0.8
LINC00404-201ENST00000418660 DHX36Q9H2U1 1008 aaKnown RBP20.06■□□□□ 0.8
LINC00404-201ENST00000418660 BTBD19C9JJ37 291 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 CXCL11O14625 94 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 CERS3Q8IU89 383 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 MAGEB6Q8N7X4 407 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
LINC00404-201ENST00000418660 LRRCC1Q9C099 1032 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
LINC00404-201ENST00000418660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.05■□□□□ 0.8
LINC00404-201ENST00000418660 PTPRAP18433 802 aa20.04■□□□□ 0.8
LINC00404-201ENST00000418660 RRP1P56182 461 aaKnown RBP20.04■□□□□ 0.8
LINC00404-201ENST00000418660 DYNLL1P63167 89 aaKnown RBP20.04■□□□□ 0.8
LINC00404-201ENST00000418660 MAPKAPK5Q8IW41 473 aa20.04■□□□□ 0.8
LINC00404-201ENST00000418660 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
LINC00404-201ENST00000418660 PI4KBQ9UBF8 816 aa20.04■□□□□ 0.8
LINC00404-201ENST00000418660 ZHX2Q9Y6X8 837 aa20.04■□□□□ 0.8
LINC00404-201ENST00000418660 MYO5AQ9Y4I1 1855 aaKnown RBP20.04■□□□□ 0.8
LINC00404-201ENST00000418660 FLT1P17948 1338 aa20.03■□□□□ 0.8
LINC00404-201ENST00000418660 SP3Q02447 781 aa20.03■□□□□ 0.8
LINC00404-201ENST00000418660 ANKRD23Q86SG2 305 aa20.03■□□□□ 0.8
LINC00404-201ENST00000418660 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
LINC00404-201ENST00000418660 FAM196BA6NMK8 535 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 ATP5JP18859 108 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 FBXO46Q6PJ61 603 aaPredicted RBP20.02■□□□□ 0.8
LINC00404-201ENST00000418660 MIGA1Q8NAN2 632 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 DNAJC2Q99543 621 aaKnown RBP20.02■□□□□ 0.8
LINC00404-201ENST00000418660 DCTPP1Q9H773 170 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 AFG3L2Q9Y4W6 797 aa20.02■□□□□ 0.8
LINC00404-201ENST00000418660 GOLIM4O00461 696 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms