RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ZSWIM5Q9P217 1185 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 ANKIB1Q9P2G1 1089 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 ZBTB43O43298 467 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 PPP4CP60510 307 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 SART3Q15020 963 aaKnown RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 SEC23AQ15436 765 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 FOXD4L6Q3SYB3 417 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 FOXD4L3Q6VB84 417 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 COL23A1Q86Y22 540 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 SP8Q8IXZ3 490 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 TMTC2Q8N394 836 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 FBXO18Q8NFZ0 1043 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 SDR42E1Q8WUS8 393 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 DCP1AQ9NPI6 582 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
LINCMD1-201ENST00000418518 FAM205AQ6ZU69 1335 aa10.58□□□□□ -0.71
LINCMD1-201ENST00000418518 SYCE3A1L190 88 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CPLX1O14810 134 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 IFIT3O14879 490 aaKnown RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 UFL1O94874 794 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 IFNAR1P17181 557 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 RXRBP28702 533 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CDC27P30260 824 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 GSTO1P78417 241 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 PPP2R5BQ15173 497 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CTR9Q6PD62 1173 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CPLX2Q6PUV4 134 aaKnown RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 BRAPQ7Z569 592 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 ESR2Q92731 530 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 SPATA32Q96LK8 384 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 PANK2Q9BZ23 570 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CD209Q9NNX6 404 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 ARPP21Q9UBL0 812 aaPredicted RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 RCOR1Q9UKL0 485 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 KIF13BQ9NQT8 1826 aa10.58□□□□□ -0.72
LINCMD1-201ENST00000418518 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 APBA3O96018 575 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 LDHBP07195 334 aaKnown RBP10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 NPR1P16066 1061 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 WTAPQ15007 396 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 RBM43Q6ZSC3 357 aaKnown RBP10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 C8orf76Q96K31 380 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 ATP6V0A2Q9Y487 856 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 SLC12A7Q9Y666 1083 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 MROH7-TTC4A0A0A0MT08 1334 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 GAKO14976 1311 aa10.57□□□□□ -0.72
LINCMD1-201ENST00000418518 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 SCN9AQ15858 1988 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 CCDC69A6NI79 296 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 RANBP6O60518 1105 aaKnown RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 LDHCP07864 332 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 SRGNP10124 158 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 NASPP49321 788 aaPredicted RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 MICU3Q86XE3 530 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 TBC1D22AQ8WUA7 517 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 PGBD1Q96JS3 809 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 FUCA2Q9BTY2 467 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 TSPY26PQ9H489 355 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 DDX19AQ9NUU7 478 aaKnown RBP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 AATFQ9NY61 560 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
LINCMD1-201ENST00000418518 ADAMTSL1Q8N6G6 1762 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 ERICH2A1L162 156 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 MINDY4BA8MYZ0 360 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 USP17L12C9JPN9 530 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 USP17L21D6R901 530 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 YEATS4O95619 227 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 PDE6BP35913 854 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 RTN1Q16799 776 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 SYNE3Q6ZMZ3 975 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 NFXL1Q6ZNB6 911 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 UBAC1Q9BSL1 405 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 RTFDC1Q9BY42 306 aaPredicted RBP10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
LINCMD1-201ENST00000418518 RTEL1Q9NZ71 1219 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms