RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 PDE8AO60658 829 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 NCAPH2Q6IBW4 605 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTCH1-205ENST00000418258 CSADQ9Y600 493 aa12.56□□□□□ -0.4
PTCH1-205ENST00000418258 V9GYY5 206 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-205ENST00000418258 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 UIMC1Q96RL1 719 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 MKRN1Q9UHC7 482 aaKnown RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 GIPC1O14908 333 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 KRT19P08727 400 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 PPP2R5CQ13362 524 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 CNNM4Q6P4Q7 775 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 HACE1Q8IYU2 909 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 NSMCE1Q8WV22 266 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 AK2P54819 239 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 ZBTB9Q96C00 473 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 PDE6BP35913 854 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 PLCD1P51178 756 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 KARSQ15046 597 aaKnown RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
PTCH1-205ENST00000418258 PRPF31Q8WWY3 499 aaKnown RBP12.55□□□□□ -0.4
PTCH1-205ENST00000418258 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 TAF5LO75529 589 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 TIMM10P62072 90 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 CUL4BQ13620 913 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 HOXC9P31274 260 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 KIF22Q14807 665 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 IP6K1Q92551 441 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 RIOK1Q9BRS2 568 aaKnown RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 TNFAIP3P21580 790 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 ZNF569Q5MCW4 686 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 CNGA1P29973 690 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 ITIH3Q06033 890 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 PDE4DQ08499 809 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
PTCH1-205ENST00000418258 SEC62Q99442 399 aaKnown RBP12.54□□□□□ -0.4
PTCH1-205ENST00000418258 TXKP42681 527 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
PTCH1-205ENST00000418258 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 GCNT3O95395 438 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 TYRO3Q06418 890 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
PTCH1-205ENST00000418258 NAP1L3Q99457 506 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-205ENST00000418258 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 CALCRLQ16602 461 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 IFNKQ9P0W0 207 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 CD2APQ9Y5K6 639 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 CFBP00751 764 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 MYCT1Q8N699 235 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-205ENST00000418258 EYA1Q99502 592 aa12.53□□□□□ -0.4
PTCH1-205ENST00000418258 MRPL44Q9H9J2 332 aaKnown RBP12.53□□□□□ -0.4
PTCH1-205ENST00000418258 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.4
PTCH1-205ENST00000418258 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.4
PTCH1-205ENST00000418258 ELP1O95163 1332 aa12.52□□□□□ -0.4
PTCH1-205ENST00000418258 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.4
PTCH1-205ENST00000418258 MRRFQ96E11 262 aaKnown RBP12.52□□□□□ -0.4
PTCH1-205ENST00000418258 DEXIO95424 95 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 NSMFQ6X4W1 530 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 MAPK8IP1Q9UQF2 711 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-205ENST00000418258 ABL1P00519 1130 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 BAG6P46379 1132 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms