RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 EDC3Q96F86 508 aaKnown RBP15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 PTPN18Q99952 460 aa15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 USP26Q9BXU7 913 aa15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 SNRKQ9NRH2 765 aa15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 LAMB1P07942 1786 aa15.83■□□□□ 0.12
HLA-DMB-258ENST00000418107 CAP1Q01518 475 aa15.82■□□□□ 0.12
HLA-DMB-258ENST00000418107 ANKRD13AQ8IZ07 590 aa15.82■□□□□ 0.12
HLA-DMB-258ENST00000418107 ELP3Q9H9T3 547 aa15.82■□□□□ 0.12
HLA-DMB-258ENST00000418107 FGFR2P21802 821 aa15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 RBM25P49756 843 aaKnown RBP15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 BECN1Q14457 450 aa15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 LRRFIP1Q32MZ4 808 aaKnown RBP15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 KIAA0100Q14667 2235 aaKnown RBP15.81■□□□□ 0.12
HLA-DMB-258ENST00000418107 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 SGSM2O43147 1006 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 SP3Q02447 781 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 UBE4AQ14139 1066 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 MFSD14BQ5SR56 506 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 CDAN1Q8IWY9 1227 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 KBTBD3Q8NAB2 608 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
HLA-DMB-258ENST00000418107 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 OTOFQ9HC10 1997 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 EN2P19622 333 aaPredicted RBP15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 PHKA1P46020 1223 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 TNFAIP1Q13829 316 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 HABP4Q5JVS0 413 aaKnown RBP15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 ARMC5Q96C12 935 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 GNL3LQ9NVN8 582 aaKnown RBP15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 TTF2Q9UNY4 1162 aaKnown RBP15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 MYH7P12883 1935 aa15.79■□□□□ 0.12
HLA-DMB-258ENST00000418107 ZAP70P43403 619 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 GYG1P46976 350 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 TDRD7Q8NHU6 1098 aaKnown RBP15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 MS4A4AQ96JQ5 239 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 ZNF512BQ96KM6 892 aaPredicted RBP15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 TEPSINQ96N21 525 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 SERPINA10Q9UK55 444 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 RFX7Q2KHR2 1363 aa15.78■□□□□ 0.12
HLA-DMB-258ENST00000418107 TCP10L2B9ZVM9 353 aa15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 BRI3BPQ8WY22 251 aa15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 RBBP6Q7Z6E9 1792 aaKnown RBP15.77■□□□□ 0.12
HLA-DMB-258ENST00000418107 RAD50Q92878 1312 aa15.77■□□□□ 0.11
HLA-DMB-258ENST00000418107 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.11
HLA-DMB-258ENST00000418107 CCL15-CCL14A0A0B4J2E2 113 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 HIBADHP31937 336 aaKnown RBP15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 MCAMP43121 646 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 BCAMP50895 628 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 VGLL4Q14135 290 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 CCL15Q16663 113 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 TICAM2Q86XR7 235 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 FAM84BQ96KN1 310 aaPredicted RBP15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 TMEM39BQ9GZU3 492 aa15.76■□□□□ 0.11
HLA-DMB-258ENST00000418107 A0A0D9SFI3 127 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 CRKP46108 304 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 MAP3K9P80192 1104 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 TAF1CQ15572 869 aaPredicted RBP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 GRIK5Q16478 980 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 ZSCAN25Q6NSZ9 544 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 ZNF333Q96JL9 665 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 ANTXR1Q9H6X2 564 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 EPB41L2O43491 1005 aaKnown RBP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 FRAT2O75474 233 aaPredicted RBP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 GTF2A2P52657 109 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 PI16Q6UXB8 463 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 FAM43AQ8N2R8 423 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 OTUD5Q96G74 571 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 LSG1Q9H089 658 aaKnown RBP15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
HLA-DMB-258ENST00000418107 MYO5AQ9Y4I1 1855 aaKnown RBP15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 ZFYP08048 801 aaPredicted RBP15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 TNNI2P48788 182 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 RABEP1Q15276 862 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 SLC9C1Q4G0N8 1177 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 IL25Q9H293 177 aa15.74■□□□□ 0.11
HLA-DMB-258ENST00000418107 HELLSQ9NRZ9 838 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms