RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 GMPRP36959 345 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 METTL16Q86W50 562 aaKnown RBP8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 MUC3BQ9H195 1237 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 STARD13Q9Y3M8 1113 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 C3P01024 1663 aa8.26□□□□□ -1.09
NIFKP3-201ENST00000417799 PIK3C2BO00750 1634 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 ERCC5P28715 1186 aaPredicted RBP8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 GDF6Q6KF10 455 aaPredicted RBP8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 ADAMTSL4Q6UY14 1074 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 NT5DC4Q86YG4 428 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 DCAF11Q8TEB1 546 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 ANKRD24Q8TF21 1146 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 ADAM19Q9H013 955 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 ZNF576Q9H609 170 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 JPH1Q9HDC5 661 aaPredicted RBP8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 RPGRIP1LQ68CZ1 1315 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 NLRP1Q9C000 1473 aa8.25□□□□□ -1.09
NIFKP3-201ENST00000417799 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 OIP5O43482 229 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 BCRP11274 1271 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 RPS26P11Q5JNZ5 115 aaPredicted RBP8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 KANK3Q6NY19 840 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 HS2ST1Q7LGA3 356 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 CACTIN-AS1Q8N1I8 211 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
NIFKP3-201ENST00000417799 FBXO24O75426 580 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 ALBP02768 609 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 CDC27P30260 824 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 CCDC85BQ15834 202 aaPredicted RBP8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 CHSY3Q70JA7 882 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 NOC4LQ9BVI4 516 aaKnown RBP8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 CEP44Q9C0F1 390 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 GGT7Q9UJ14 662 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 KIF1BO60333 1816 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 ADGRB3O60242 1522 aa8.23□□□□□ -1.09
NIFKP3-201ENST00000417799 A2ML1A8K2U0 1454 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 M0R082 166 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 LILRB5O75023 590 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 CELA2BP08218 269 aaPredicted RBP8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 GRIK5Q16478 980 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 SV2BQ7L1I2 683 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 VN1R5Q7Z5H4 357 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
NIFKP3-201ENST00000417799 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.09
NIFKP3-201ENST00000417799 SETD1BQ9UPS6 1966 aaKnown RBP8.21□□□□□ -1.09
NIFKP3-201ENST00000417799 SHISA8B8ZZ34 492 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 AMPD1P23109 780 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 CABP4P57796 275 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 PCDH1Q08174 1060 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 RAD51AP2Q09MP3 1159 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 FAAP100Q0VG06 881 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 THEMISQ8N1K5 641 aaPredicted RBP8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 IL22RA1Q8N6P7 574 aa8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 GPN3Q9UHW5 284 aaPredicted RBP8.21□□□□□ -1.1
NIFKP3-201ENST00000417799 UHRF1BP1Q6BDS2 1440 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 EPHA1P21709 976 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 ERMP1Q7Z2K6 904 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 NECAB3Q96P71 396 aaPredicted RBP8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 TGIF2Q9GZN2 237 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 TMEM2Q9UHN6 1383 aa8.2□□□□□ -1.1
NIFKP3-201ENST00000417799 KDM5AP29375 1690 aaKnown RBP8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF157P51786 506 aaPredicted RBP8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 IKBKEQ14164 716 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF423Q2M1K9 1284 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 TRIM56Q9BRZ2 755 aaKnown RBP8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 RSRP1Q9BUV0 290 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 ADGRF5Q8IZF2 1346 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 ZFYVE9O95405 1425 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 RIMS2Q9UQ26 1411 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 MYOM2P54296 1465 aa8.19□□□□□ -1.1
NIFKP3-201ENST00000417799 CEP170BQ9Y4F5 1589 aaPredicted RBP8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 MYO3AQ8NEV4 1616 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 UBR1Q8IWV7 1749 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 H3BRJ5 948 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 ENC1O14682 589 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 B3GALT4O96024 378 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 CELA3AP09093 270 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 ESRRAP11474 423 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms