RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 PCDHAC2Q9Y5I4 1007 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 MYH1P12882 1939 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 KDM4AO75164 1064 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 USP5P45974 858 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 RHBDL3P58872 404 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 MFSD6Q6ZSS7 791 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 ILDR2Q71H61 639 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 ATP8A2Q9NTI2 1148 aa20.06■□□□□ 0.8
CALD1-204ENST00000417172 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
CALD1-204ENST00000417172 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 STRIP1Q5VSL9 837 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 MAPKAPK5Q8IW41 473 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 FAM163AQ96GL9 167 aaPredicted RBP20.05■□□□□ 0.8
CALD1-204ENST00000417172 SENP2Q9HC62 589 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 MCM9Q9NXL9 1143 aa20.05■□□□□ 0.8
CALD1-204ENST00000417172 NAP1L2Q9ULW6 460 aaPredicted RBP20.05■□□□□ 0.8
CALD1-204ENST00000417172 IGSF3O75054 1194 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 PRDM1O75626 825 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 RAB11FIP4Q86YS3 637 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 LARGE2Q8N3Y3 721 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 CWC22Q9HCG8 908 aaKnown RBP20.04■□□□□ 0.8
CALD1-204ENST00000417172 ZSWIM5Q9P217 1185 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 SAP30BPQ9UHR5 308 aaKnown RBP20.04■□□□□ 0.8
CALD1-204ENST00000417172 ANAPC4Q9UJX5 808 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 BCS1LQ9Y276 419 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 SUGT1Q9Y2Z0 365 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 CD2APQ9Y5K6 639 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 RAB3GAP1Q15042 981 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 TEX11Q8IYF3 940 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 ZKSCAN3Q9BRR0 538 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 BRPF3Q9ULD4 1205 aa20.04■□□□□ 0.8
CALD1-204ENST00000417172 SCRN1Q12765 414 aa20.03■□□□□ 0.8
CALD1-204ENST00000417172 FOXD4L5Q5VV16 416 aaPredicted RBP20.03■□□□□ 0.8
CALD1-204ENST00000417172 SLF2Q8IX21 1173 aa20.03■□□□□ 0.8
CALD1-204ENST00000417172 FOXD4L4Q8WXT5 416 aaPredicted RBP20.03■□□□□ 0.8
CALD1-204ENST00000417172 RAD17O75943 681 aa20.02■□□□□ 0.8
CALD1-204ENST00000417172 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.8
CALD1-204ENST00000417172 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.8
CALD1-204ENST00000417172 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
CALD1-204ENST00000417172 GTF3C6Q969F1 213 aa20.02■□□□□ 0.8
CALD1-204ENST00000417172 NCOA5Q9HCD5 579 aaKnown RBP20.02■□□□□ 0.8
CALD1-204ENST00000417172 ZDHHC9Q9Y397 364 aa20.02■□□□□ 0.8
CALD1-204ENST00000417172 CNNM2Q9H8M5 875 aa20.02■□□□□ 0.79
CALD1-204ENST00000417172 ARPP21Q9UBL0 812 aaPredicted RBP20.02■□□□□ 0.79
CALD1-204ENST00000417172 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.79
CALD1-204ENST00000417172 FLT1P17948 1338 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 NFKBIEO00221 500 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
CALD1-204ENST00000417172 GJB2P29033 226 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 PDIA3P30101 505 aaKnown RBP20.01■□□□□ 0.79
CALD1-204ENST00000417172 FBXL16Q8N461 479 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 KRT23Q9C075 422 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 SMC3Q9UQE7 1217 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
CALD1-204ENST00000417172 ARFGEF1Q9Y6D6 1849 aa20■□□□□ 0.79
CALD1-204ENST00000417172 KLF18A0A0U1RQI7 1052 aa20■□□□□ 0.79
CALD1-204ENST00000417172 PPFIA3O75145 1194 aa20■□□□□ 0.79
CALD1-204ENST00000417172 CRKP46108 304 aa20■□□□□ 0.79
CALD1-204ENST00000417172 SBK1Q52WX2 424 aa20■□□□□ 0.79
CALD1-204ENST00000417172 IGDCC4Q8TDY8 1250 aa20■□□□□ 0.79
CALD1-204ENST00000417172 TEKT1Q969V4 418 aa20■□□□□ 0.79
CALD1-204ENST00000417172 DYNLL2Q96FJ2 89 aa20■□□□□ 0.79
CALD1-204ENST00000417172 RNF41Q9H4P4 317 aaPredicted RBP20■□□□□ 0.79
CALD1-204ENST00000417172 JAK2O60674 1132 aa20■□□□□ 0.79
CALD1-204ENST00000417172 PFKFB2O60825 505 aa20■□□□□ 0.79
CALD1-204ENST00000417172 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
CALD1-204ENST00000417172 PLCD1P51178 756 aa20■□□□□ 0.79
CALD1-204ENST00000417172 PICALMQ13492 652 aa20■□□□□ 0.79
CALD1-204ENST00000417172 SOGA3Q5TF21 947 aa20■□□□□ 0.79
CALD1-204ENST00000417172 APOBEC3HQ6NTF7 200 aaKnown RBP20■□□□□ 0.79
CALD1-204ENST00000417172 LY9Q9HBG7 655 aa20■□□□□ 0.79
CALD1-204ENST00000417172 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
CALD1-204ENST00000417172 C12orf60Q5U649 245 aa19.99■□□□□ 0.79
CALD1-204ENST00000417172 TAOK3Q9H2K8 898 aa19.99■□□□□ 0.79
CALD1-204ENST00000417172 DDX4Q9NQI0 724 aaKnown RBP19.99■□□□□ 0.79
CALD1-204ENST00000417172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
CALD1-204ENST00000417172 GOLGA8BA8MQT2 603 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 PSMD14O00487 310 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 IFIT3O14879 490 aaKnown RBP19.98■□□□□ 0.79
CALD1-204ENST00000417172 PLCG2P16885 1265 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 RXRAP19793 462 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 FKBP1AP62942 108 aaKnown RBP19.98■□□□□ 0.79
CALD1-204ENST00000417172 RASSF7Q02833 373 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 TMEM67Q5HYA8 995 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 SLC44A5Q8NCS7 719 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 CHAMP1Q96JM3 812 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 HPS5Q9UPZ3 1129 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 RANBP6O60518 1105 aaKnown RBP19.98■□□□□ 0.79
CALD1-204ENST00000417172 EVCP57679 992 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 HHIPL2Q6UWX4 724 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 ZNF274Q96GC6 653 aaPredicted RBP19.98■□□□□ 0.79
CALD1-204ENST00000417172 MYL10Q9BUA6 226 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 SPON1Q9HCB6 807 aa19.98■□□□□ 0.79
CALD1-204ENST00000417172 USP40Q9NVE5 1235 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms