RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 OTUD5Q96G74 571 aa19.12■□□□□ 0.65
ITGB1-204ENST00000417122 DDX4Q9NQI0 724 aaKnown RBP19.12■□□□□ 0.65
ITGB1-204ENST00000417122 ZNF112Q9UJU3 913 aa19.12■□□□□ 0.65
ITGB1-204ENST00000417122 GPR25O00155 361 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 APBB1O00213 710 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-204ENST00000417122 INPP5BP32019 993 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 NOM1Q5C9Z4 860 aaKnown RBP19.11■□□□□ 0.65
ITGB1-204ENST00000417122 OTUD7BQ6GQQ9 843 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 NAA16Q6N069 864 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-204ENST00000417122 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 ZSCAN29Q8IWY8 852 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-204ENST00000417122 ZNF296Q8WUU4 475 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-204ENST00000417122 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
ITGB1-204ENST00000417122 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
ITGB1-204ENST00000417122 IGSF3O75054 1194 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 RAB11FIP3O75154 756 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 GTF2A2P52657 109 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 SH3BP5LQ7L8J4 393 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
ITGB1-204ENST00000417122 PTPN18Q99952 460 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 NOL10Q9BSC4 688 aaKnown RBP19.1■□□□□ 0.65
ITGB1-204ENST00000417122 R3HDMLQ9H3Y0 253 aa19.1■□□□□ 0.65
ITGB1-204ENST00000417122 ATRNL1Q5VV63 1379 aa19.09■□□□□ 0.65
ITGB1-204ENST00000417122 NPM3O75607 178 aaKnown RBP19.09■□□□□ 0.65
ITGB1-204ENST00000417122 YTHDC1Q96MU7 727 aaKnown RBP19.09■□□□□ 0.65
ITGB1-204ENST00000417122 PIH1D3Q9NQM4 214 aaKnown RBP19.09■□□□□ 0.65
ITGB1-204ENST00000417122 CCL15-CCL14A0A0B4J2E2 113 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 BAG3O95817 575 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 PPATQ06203 517 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 PPIL2Q13356 520 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 CCL15Q16663 113 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 CTU1Q7Z7A3 348 aaKnown RBP19.08■□□□□ 0.64
ITGB1-204ENST00000417122 BRI3BPQ8WY22 251 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 AATFQ9NY61 560 aaKnown RBP eCLIP19.08■□□□□ 0.642e-7■□□□□ 10.9
ITGB1-204ENST00000417122 NDUFB9Q9Y6M9 179 aa19.08■□□□□ 0.64
ITGB1-204ENST00000417122 IRF6O14896 467 aa19.07■□□□□ 0.64
ITGB1-204ENST00000417122 FKTNO75072 461 aa19.07■□□□□ 0.64
ITGB1-204ENST00000417122 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
ITGB1-204ENST00000417122 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
ITGB1-204ENST00000417122 NOL9Q5SY16 702 aaKnown RBP19.07■□□□□ 0.64
ITGB1-204ENST00000417122 TEX11Q8IYF3 940 aa19.07■□□□□ 0.64
ITGB1-204ENST00000417122 SH3RF3Q8TEJ3 882 aaPredicted RBP19.07■□□□□ 0.64
ITGB1-204ENST00000417122 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
ITGB1-204ENST00000417122 IDH1O75874 414 aaKnown RBP19.06■□□□□ 0.64
ITGB1-204ENST00000417122 PLCG2P16885 1265 aa19.06■□□□□ 0.64
ITGB1-204ENST00000417122 PPP4CP60510 307 aa19.06■□□□□ 0.64
ITGB1-204ENST00000417122 SNAPC2Q13487 334 aa19.06■□□□□ 0.64
ITGB1-204ENST00000417122 ADGRA1Q86SQ6 560 aa19.06■□□□□ 0.64
ITGB1-204ENST00000417122 OSBPL5Q9H0X9 879 aaPredicted RBP19.06■□□□□ 0.64
ITGB1-204ENST00000417122 ANTXR1Q9H6X2 564 aa19.06■□□□□ 0.64
ITGB1-204ENST00000417122 CDK5RAP2Q96SN8 1893 aa19.05■□□□□ 0.64
ITGB1-204ENST00000417122 COL2A1P02458 1487 aaPredicted RBP19.05■□□□□ 0.64
ITGB1-204ENST00000417122 PHF20L1A8MW92 1017 aa19.05■□□□□ 0.64
ITGB1-204ENST00000417122 CETPP11597 493 aa19.05■□□□□ 0.64
ITGB1-204ENST00000417122 CYP7A1P22680 504 aa19.05■□□□□ 0.64
ITGB1-204ENST00000417122 CRHR2Q13324 411 aa19.05■□□□□ 0.64
ITGB1-204ENST00000417122 CCDC85CA6NKD9 419 aa19.04■□□□□ 0.64
ITGB1-204ENST00000417122 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
ITGB1-204ENST00000417122 MAP3K12Q12852 859 aa19.04■□□□□ 0.64
ITGB1-204ENST00000417122 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
ITGB1-204ENST00000417122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.04■□□□□ 0.64
ITGB1-204ENST00000417122 FOCADQ5VW36 1801 aa19.04■□□□□ 0.64
ITGB1-204ENST00000417122 TBC1D12O60347 775 aa19.03■□□□□ 0.64
ITGB1-204ENST00000417122 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
ITGB1-204ENST00000417122 SCYL3Q8IZE3 742 aa19.03■□□□□ 0.64
ITGB1-204ENST00000417122 MAGEB6Q8N7X4 407 aa19.03■□□□□ 0.64
ITGB1-204ENST00000417122 TGFBRAP1Q8WUH2 860 aa19.03■□□□□ 0.64
ITGB1-204ENST00000417122 DOCK1Q14185 1865 aa19.03■□□□□ 0.64
ITGB1-204ENST00000417122 CTNND1O60716 968 aaKnown RBP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 DYNLL1P63167 89 aaKnown RBP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 TTF1Q15361 905 aaPredicted RBP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 TAF1CQ15572 869 aaPredicted RBP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 PKN2Q16513 984 aaKnown RBP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 LRRCC1Q9C099 1032 aa19.02■□□□□ 0.64
ITGB1-204ENST00000417122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.02■□□□□ 0.64
ITGB1-204ENST00000417122 ZFYVE28Q9HCC9 887 aa19.02■□□□□ 0.64
ITGB1-204ENST00000417122 PICK1Q9NRD5 415 aa19.02■□□□□ 0.64
ITGB1-204ENST00000417122 KCNH4Q9UQ05 1017 aa19.02■□□□□ 0.64
ITGB1-204ENST00000417122 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
ITGB1-204ENST00000417122 TMED8Q6PL24 325 aaPredicted RBP19.01■□□□□ 0.63
ITGB1-204ENST00000417122 MAPKAPK5Q8IW41 473 aa19.01■□□□□ 0.63
ITGB1-204ENST00000417122 MIGA1Q8NAN2 632 aa19.01■□□□□ 0.63
ITGB1-204ENST00000417122 DNAJC2Q99543 621 aaKnown RBP19.01■□□□□ 0.63
ITGB1-204ENST00000417122 DHX36Q9H2U1 1008 aaKnown RBP19.01■□□□□ 0.63
ITGB1-204ENST00000417122 ZCCHC17Q9NP64 241 aaKnown RBP19.01■□□□□ 0.63
ITGB1-204ENST00000417122 ZHX2Q9Y6X8 837 aa19.01■□□□□ 0.63
ITGB1-204ENST00000417122 FLT1P17948 1338 aa19■□□□□ 0.63
ITGB1-204ENST00000417122 FAM196BA6NMK8 535 aa19■□□□□ 0.63
ITGB1-204ENST00000417122 PTPRAP18433 802 aa19■□□□□ 0.63
ITGB1-204ENST00000417122 CERS3Q8IU89 383 aa19■□□□□ 0.63
ITGB1-204ENST00000417122 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
ITGB1-204ENST00000417122 GOLIM4O00461 696 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 CXCL11O14625 94 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
ITGB1-204ENST00000417122 SP3Q02447 781 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 ERO1AQ96HE7 468 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 DCTPP1Q9H773 170 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
ITGB1-204ENST00000417122 SIPA1L1O43166 1804 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms