RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 FOXN1O15353 648 aa23.21■■□□□ 1.31
CCDC148-204ENST00000417066 IGSF3O75054 1194 aa23.21■■□□□ 1.31
CCDC148-204ENST00000417066 ANKRD13AQ8IZ07 590 aa23.21■■□□□ 1.31
CCDC148-204ENST00000417066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.21■■□□□ 1.31
CCDC148-204ENST00000417066 MAST2Q6P0Q8 1798 aa23.21■■□□□ 1.31
CCDC148-204ENST00000417066 AK9Q5TCS8 1911 aa23.21■■□□□ 1.31
CCDC148-204ENST00000417066 CHGBP05060 677 aa23.2■■□□□ 1.3
CCDC148-204ENST00000417066 PDE6AP16499 860 aa23.2■■□□□ 1.3
CCDC148-204ENST00000417066 CSRNP1Q96S65 589 aa23.2■■□□□ 1.3
CCDC148-204ENST00000417066 MAP3K9P80192 1104 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 DCAF15Q66K64 600 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 B4GALNT3Q6L9W6 998 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 TGFBRAP1Q8WUH2 860 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 HOOK2Q96ED9 719 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 GPATCH3Q96I76 525 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 WRNIP1Q96S55 665 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 ELP3Q9H9T3 547 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 DOCK2Q92608 1830 aa23.19■■□□□ 1.3
CCDC148-204ENST00000417066 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
CCDC148-204ENST00000417066 VGLL4Q14135 290 aa23.18■■□□□ 1.3
CCDC148-204ENST00000417066 SPRYD7Q5W111 196 aa23.18■■□□□ 1.3
CCDC148-204ENST00000417066 CNKSR2Q8WXI2 1034 aa23.18■■□□□ 1.3
CCDC148-204ENST00000417066 ZKSCAN4Q969J2 545 aaPredicted RBP23.18■■□□□ 1.3
CCDC148-204ENST00000417066 OSBPL5Q9H0X9 879 aaPredicted RBP23.18■■□□□ 1.3
CCDC148-204ENST00000417066 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
CCDC148-204ENST00000417066 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
CCDC148-204ENST00000417066 TCRBV5S4A2TA0A5A2 114 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 NPM3O75607 178 aaKnown RBP23.17■■□□□ 1.3
CCDC148-204ENST00000417066 PLCG2P16885 1265 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 GJA5P36382 358 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 MAPKAPK5Q8IW41 473 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 WNK4Q96J92 1243 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 ZNF341Q9BYN7 854 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 TSKSQ9UJT2 592 aa23.17■■□□□ 1.3
CCDC148-204ENST00000417066 UNCXA6NJT0 531 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 INPP5BP32019 993 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 PI4K2BQ8TCG2 481 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 ATRNL1Q5VV63 1379 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 SALL3Q9BXA9 1300 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 OTOFQ9HC10 1997 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 MX1P20591 662 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 RIOK1Q9BRS2 568 aaKnown RBP23.16■■□□□ 1.3
CCDC148-204ENST00000417066 BEGAINQ9BUH8 593 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 CSADQ9Y600 493 aa23.16■■□□□ 1.3
CCDC148-204ENST00000417066 FLT1P17948 1338 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 TTC41PQ6P2S7 1318 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 FAM196BA6NMK8 535 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 ADD2P35612 726 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 ZNF112Q9UJU3 913 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 SNCAIPQ9Y6H5 919 aa23.15■■□□□ 1.3
CCDC148-204ENST00000417066 MAGEB6P1A0A0J9YX57 407 aa23.14■■□□□ 1.29
CCDC148-204ENST00000417066 SAP30BPQ9UHR5 308 aaKnown RBP23.14■■□□□ 1.29
CCDC148-204ENST00000417066 PHF20L1A8MW92 1017 aa23.13■■□□□ 1.29
CCDC148-204ENST00000417066 SLC4A8Q2Y0W8 1093 aa23.13■■□□□ 1.29
CCDC148-204ENST00000417066 TMED8Q6PL24 325 aaPredicted RBP23.13■■□□□ 1.29
CCDC148-204ENST00000417066 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCDC148-204ENST00000417066 PALD1Q9ULE6 856 aa23.13■■□□□ 1.29
CCDC148-204ENST00000417066 ERC2O15083 957 aa23.12■■□□□ 1.29
CCDC148-204ENST00000417066 HSPA8P11142 646 aaKnown RBP23.12■■□□□ 1.29
CCDC148-204ENST00000417066 USP5P45974 858 aa23.12■■□□□ 1.29
CCDC148-204ENST00000417066 MAP3K10Q02779 954 aa23.12■■□□□ 1.29
CCDC148-204ENST00000417066 TRPA1O75762 1119 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 GLRX3O76003 335 aaKnown RBP23.11■■□□□ 1.29
CCDC148-204ENST00000417066 ZBTB48P10074 688 aaPredicted RBP23.11■■□□□ 1.29
CCDC148-204ENST00000417066 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
CCDC148-204ENST00000417066 LBX1P52954 281 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 NUCB1Q02818 461 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 LCORLQ8N3X6 602 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 OTUD5Q96G74 571 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 RNF186Q9NXI6 227 aa23.11■■□□□ 1.29
CCDC148-204ENST00000417066 TM4SF4P48230 202 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 PDE1AP54750 535 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 CHD1LQ86WJ1 897 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 KBTBD3Q8NAB2 608 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 ARMT1Q9H993 441 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.29
CCDC148-204ENST00000417066 CDK5RAP2Q96SN8 1893 aa23.1■■□□□ 1.29
CCDC148-204ENST00000417066 SPDYE5A6NIY4 337 aa23.09■■□□□ 1.29
CCDC148-204ENST00000417066 UBE3CQ15386 1083 aa23.09■■□□□ 1.29
CCDC148-204ENST00000417066 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
CCDC148-204ENST00000417066 STAP2Q9UGK3 403 aa23.09■■□□□ 1.29
CCDC148-204ENST00000417066 COL2A1P02458 1487 aaPredicted RBP23.09■■□□□ 1.29
CCDC148-204ENST00000417066 TBC1D12O60347 775 aa23.08■■□□□ 1.29
CCDC148-204ENST00000417066 MBD4O95243 580 aa23.08■■□□□ 1.29
CCDC148-204ENST00000417066 ERO1BQ86YB8 467 aa23.08■■□□□ 1.29
CCDC148-204ENST00000417066 REM2Q8IYK8 340 aaPredicted RBP23.08■■□□□ 1.29
CCDC148-204ENST00000417066 SDR42E1Q8WUS8 393 aa23.08■■□□□ 1.29
CCDC148-204ENST00000417066 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.29
CCDC148-204ENST00000417066 DHX36Q9H2U1 1008 aaKnown RBP23.08■■□□□ 1.29
CCDC148-204ENST00000417066 PI4KBQ9UBF8 816 aa23.08■■□□□ 1.29
CCDC148-204ENST00000417066 MANSC4A6NHS7 340 aaPredicted RBP23.08■■□□□ 1.28
CCDC148-204ENST00000417066 PRKAB2O43741 272 aa23.08■■□□□ 1.28
CCDC148-204ENST00000417066 SREBF2Q12772 1141 aa23.08■■□□□ 1.28
CCDC148-204ENST00000417066 COL13A1Q5TAT6 717 aaPredicted RBP23.08■■□□□ 1.28
CCDC148-204ENST00000417066 ZSCAN25Q6NSZ9 544 aa23.08■■□□□ 1.28
CCDC148-204ENST00000417066 MS4A4AQ96JQ5 239 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms