RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TLR7Q9NYK1 1049 aaKnown RBP18.64■□□□□ 0.57
UBXN4-203ENST00000416538 ZNF112Q9UJU3 913 aa18.64■□□□□ 0.57
UBXN4-203ENST00000416538 PDE4DIPQ5VU43 2346 aa18.63■□□□□ 0.57
UBXN4-203ENST00000416538 IRF6O14896 467 aa18.63■□□□□ 0.57
UBXN4-203ENST00000416538 DCAF15Q66K64 600 aa18.63■□□□□ 0.57
UBXN4-203ENST00000416538 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
UBXN4-203ENST00000416538 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
UBXN4-203ENST00000416538 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
UBXN4-203ENST00000416538 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
UBXN4-203ENST00000416538 DDTLA6NHG4 134 aaPredicted RBP18.62■□□□□ 0.57
UBXN4-203ENST00000416538 SURF6O75683 361 aaKnown RBP18.62■□□□□ 0.57
UBXN4-203ENST00000416538 PPIL2Q13356 520 aa18.62■□□□□ 0.57
UBXN4-203ENST00000416538 ERICH6Q7L0X2 663 aa18.62■□□□□ 0.57
UBXN4-203ENST00000416538 NSUN4Q96CB9 384 aaKnown RBP18.62■□□□□ 0.57
UBXN4-203ENST00000416538 GPR108Q9NPR9 543 aa18.62■□□□□ 0.57
UBXN4-203ENST00000416538 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
UBXN4-203ENST00000416538 MGAMO43451 1857 aa18.62■□□□□ 0.57
UBXN4-203ENST00000416538 TNRC18O15417 2968 aaPredicted RBP18.62■□□□□ 0.57
UBXN4-203ENST00000416538 GPR75-ASB3A0A0A6YYF3 556 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 GTF2A2P52657 109 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 OTOP1Q7RTM1 612 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 CD99L2Q8TCZ2 262 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 HOOK2Q96ED9 719 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
UBXN4-203ENST00000416538 LOC285556D6RIA3 1793 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 KIAA0100Q14667 2235 aaKnown RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 ENTPD3O75355 529 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 OS9Q13438 667 aaPredicted RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 PICALMQ13492 652 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 NOL9Q5SY16 702 aaKnown RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 SPTY2D1Q68D10 685 aaPredicted RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 FBXO46Q6PJ61 603 aaPredicted RBP18.6■□□□□ 0.57
UBXN4-203ENST00000416538 MYH1P12882 1939 aa18.6■□□□□ 0.57
UBXN4-203ENST00000416538 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 BTBD19C9JJ37 291 aa18.59■□□□□ 0.57
UBXN4-203ENST00000416538 MOGSQ13724 837 aa18.59■□□□□ 0.57
UBXN4-203ENST00000416538 TAF1CQ15572 869 aaPredicted RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 PKN2Q16513 984 aaKnown RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 ADGRA1Q86SQ6 560 aa18.59■□□□□ 0.57
UBXN4-203ENST00000416538 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.59■□□□□ 0.57
UBXN4-203ENST00000416538 TRIM17Q9Y577 477 aa18.59■□□□□ 0.57
UBXN4-203ENST00000416538 FAM196BA6NMK8 535 aa18.58■□□□□ 0.56
UBXN4-203ENST00000416538 UQCRFS1P1P0C7P4 283 aa18.58■□□□□ 0.56
UBXN4-203ENST00000416538 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.56
UBXN4-203ENST00000416538 KCNH4Q9UQ05 1017 aa18.58■□□□□ 0.56
UBXN4-203ENST00000416538 EXOC6BQ9Y2D4 811 aa18.58■□□□□ 0.56
UBXN4-203ENST00000416538 CENPFP49454 3210 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
UBXN4-203ENST00000416538 MLLT1Q03111 559 aaPredicted RBP18.57■□□□□ 0.56
UBXN4-203ENST00000416538 PPATQ06203 517 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 SNAPC2Q13487 334 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 TTC39AQ5SRH9 613 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 SLF2Q8IX21 1173 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 CCDC8Q9H0W5 538 aaPredicted RBP18.57■□□□□ 0.56
UBXN4-203ENST00000416538 PIH1D3Q9NQM4 214 aaKnown RBP18.57■□□□□ 0.56
UBXN4-203ENST00000416538 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
UBXN4-203ENST00000416538 ADGRA2Q96PE1 1338 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 CETPP11597 493 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 ZAP70P43403 619 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 MAP3K10Q02779 954 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 NAV1Q8NEY1 1877 aa18.56■□□□□ 0.56
UBXN4-203ENST00000416538 MYH7P12883 1935 aa18.55■□□□□ 0.56
UBXN4-203ENST00000416538 SP3Q02447 781 aa18.55■□□□□ 0.56
UBXN4-203ENST00000416538 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-203ENST00000416538 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-203ENST00000416538 SIRT2Q8IXJ6 389 aa18.55■□□□□ 0.56
UBXN4-203ENST00000416538 SH3RF3Q8TEJ3 882 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-203ENST00000416538 ERO1AQ96HE7 468 aa18.55■□□□□ 0.56
UBXN4-203ENST00000416538 ZNF512BQ96KM6 892 aaPredicted RBP18.55■□□□□ 0.56
UBXN4-203ENST00000416538 NDUFB9Q9Y6M9 179 aa18.55■□□□□ 0.56
UBXN4-203ENST00000416538 SCYL3Q8IZE3 742 aa18.54■□□□□ 0.56
UBXN4-203ENST00000416538 ARHGAP39Q9C0H5 1083 aa18.54■□□□□ 0.56
UBXN4-203ENST00000416538 ZFYVE28Q9HCC9 887 aa18.54■□□□□ 0.56
UBXN4-203ENST00000416538 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
UBXN4-203ENST00000416538 DOCK3Q8IZD9 2030 aa18.54■□□□□ 0.56
UBXN4-203ENST00000416538 BRCA2P51587 3418 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 TLR2O60603 784 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 GSTO1P78417 241 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 RRP1BQ14684 758 aaKnown RBP18.53■□□□□ 0.56
UBXN4-203ENST00000416538 CCDC158Q5M9N0 1113 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 OSBPL5Q9H0X9 879 aaPredicted RBP18.53■□□□□ 0.56
UBXN4-203ENST00000416538 ZCCHC17Q9NP64 241 aaKnown RBP18.53■□□□□ 0.56
UBXN4-203ENST00000416538 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 AATFQ9NY61 560 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBXN4-203ENST00000416538 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
UBXN4-203ENST00000416538 LDHCP07864 332 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 PTPRAP18433 802 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 CTGFP29279 349 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 GPAT2Q6NUI2 795 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 TEX11Q8IYF3 940 aa18.52■□□□□ 0.56
UBXN4-203ENST00000416538 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms