RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
RFFL-205ENST00000415395 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
RFFL-205ENST00000415395 BAZ2AQ9UIF9 1905 aaKnown RBP13.55□□□□□ -0.24
RFFL-205ENST00000415395 UQCRHLA0A096LP55 91 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 BAG3O95817 575 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 UQCRHP07919 91 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 TGFB2P61812 414 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 FKBP1AP62942 108 aaKnown RBP13.54□□□□□ -0.24
RFFL-205ENST00000415395 FGD1P98174 961 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 ME3Q16798 604 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 TTLL6Q8N841 843 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 NOL10Q9BSC4 688 aaKnown RBP13.54□□□□□ -0.24
RFFL-205ENST00000415395 MTA3Q9BTC8 594 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 PSME4Q14997 1843 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 BRCA1P38398 1863 aaKnown RBP13.54□□□□□ -0.24
RFFL-205ENST00000415395 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
RFFL-205ENST00000415395 MROH7-TTC4A0A0A0MT08 1334 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
RFFL-205ENST00000415395 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 PRKAB2O43741 272 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 PDCP20941 246 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 NT5C2P49902 561 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 EVCP57679 992 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 AKNAD1Q5T1N1 836 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 KRT23Q9C075 422 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 G3V3G9 751 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 PLCG2P16885 1265 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 DYNLL1P63167 89 aaKnown RBP13.53□□□□□ -0.24
RFFL-205ENST00000415395 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
RFFL-205ENST00000415395 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 RTKN2Q8IZC4 609 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■□□□ 14.1
RFFL-205ENST00000415395 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 AATFQ9NY61 560 aaKnown RBP eCLIP13.53□□□□□ -0.24
RFFL-205ENST00000415395 JAG2Q9Y219 1238 aa13.53□□□□□ -0.24
RFFL-205ENST00000415395 GAKO14976 1311 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 LARGE1O95461 756 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 SYT1P21579 422 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 GTF2IP78347 998 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 PPARAQ07869 468 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 CCDC93Q567U6 631 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 MFSD6Q6ZSS7 791 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 BRF1Q92994 677 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
RFFL-205ENST00000415395 TMEM87BQ96K49 555 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 VPS33BQ9H267 617 aa13.52□□□□□ -0.25
RFFL-205ENST00000415395 ARPP21Q9UBL0 812 aaPredicted RBP13.52□□□□□ -0.25
RFFL-205ENST00000415395 GPR75-ASB3A0A0A6YYF3 556 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 PRC1O43663 620 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
RFFL-205ENST00000415395 KCNA3P22001 575 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 DNTTIP2Q5QJE6 756 aaKnown RBP13.51□□□□□ -0.25
RFFL-205ENST00000415395 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 GTF3C6Q969F1 213 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 PSMD1Q99460 953 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 DCP1AQ9NPI6 582 aaPredicted RBP13.51□□□□□ -0.25
RFFL-205ENST00000415395 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
RFFL-205ENST00000415395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.252e-8■■■■■ 28.1
RFFL-205ENST00000415395 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
RFFL-205ENST00000415395 PFKFB2O60825 505 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 DPEP1P16444 411 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
RFFL-205ENST00000415395 TCHHQ07283 1943 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 ZBTB7AO95365 584 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 SLC3A2P08195 630 aaKnown RBP13.5□□□□□ -0.25
RFFL-205ENST00000415395 FGRP09769 529 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 ANTXR2P58335 489 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 GRIK5Q16478 980 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 STRIP1Q5VSL9 837 aa13.5□□□□□ -0.25
RFFL-205ENST00000415395 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
RFFL-205ENST00000415395 SCN9AQ15858 1988 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 NEDD4P46934 1319 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 ADCY5O95622 1261 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 CCDC192P0DO97 292 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 GJB2P29033 226 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 KRT85P78386 507 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 CTR9Q6PD62 1173 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 CHAMP1Q96JM3 812 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 MRIQ9BWK5 157 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms