RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 USP5P45974 858 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 INHBEP58166 350 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 SREBF2Q12772 1141 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 MIGA2Q7L4E1 593 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
CHD1-202ENST00000414220 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 FZD1Q9UP38 647 aa17.8■□□□□ 0.44
CHD1-202ENST00000414220 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
CHD1-202ENST00000414220 MX1P20591 662 aa17.79■□□□□ 0.44
CHD1-202ENST00000414220 CTCFP49711 727 aaPredicted RBP17.79■□□□□ 0.44
CHD1-202ENST00000414220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHD1-202ENST00000414220 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
CHD1-202ENST00000414220 AKAP11Q9UKA4 1901 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 PDE6AP16499 860 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
CHD1-202ENST00000414220 SPRYD7Q5W111 196 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 TGFBRAP1Q8WUH2 860 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 TRIM34Q9BYJ4 488 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
CHD1-202ENST00000414220 SSC5DA1L4H1 1573 aa17.78■□□□□ 0.44
CHD1-202ENST00000414220 ZNF532Q9HCE3 1301 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.44
CHD1-202ENST00000414220 HLA-DOAP06340 250 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
CHD1-202ENST00000414220 OTUD7BQ6GQQ9 843 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 B4GALNT3Q6L9W6 998 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 ADGRA1Q86SQ6 560 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 ZFPM1Q8IX07 1006 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 WNK4Q96J92 1243 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
CHD1-202ENST00000414220 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
CHD1-202ENST00000414220 TBC1D12O60347 775 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
CHD1-202ENST00000414220 VGLL4Q14135 290 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 UBE3CQ15386 1083 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
CHD1-202ENST00000414220 MAPKAPK5Q8IW41 473 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 CLMNQ96JQ2 1002 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
CHD1-202ENST00000414220 DDTLA6NHG4 134 aaPredicted RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 ZFYP08048 801 aaPredicted RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 ADD2P35612 726 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 ERO1BQ86YB8 467 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 FOXP4Q8IVH2 680 aaPredicted RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 EDC3Q96F86 508 aaKnown RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHD1-202ENST00000414220 SAGE1Q9NXZ1 904 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
CHD1-202ENST00000414220 MAST2Q6P0Q8 1798 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
CHD1-202ENST00000414220 FLT1P17948 1338 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 FOXN1O15353 648 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 ALDH1A1P00352 501 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 IGHDP01880 384 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 TM4SF4P48230 202 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 AMOTL1Q8IY63 956 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
CHD1-202ENST00000414220 ZIC5Q96T25 663 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 PICK1Q9NRD5 415 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 ZNF112Q9UJU3 913 aa17.74■□□□□ 0.43
CHD1-202ENST00000414220 COL2A1P02458 1487 aaPredicted RBP17.74■□□□□ 0.43
CHD1-202ENST00000414220 AK9Q5TCS8 1911 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 GTF2A2P52657 109 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 MAP3K10Q02779 954 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 PPATQ06203 517 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 TSHZ3Q63HK5 1081 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 SH3BP5LQ7L8J4 393 aa17.73■□□□□ 0.43
CHD1-202ENST00000414220 TCRBV5S4A2TA0A5A2 114 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 CTNND1O60716 968 aaKnown RBP17.72■□□□□ 0.43
CHD1-202ENST00000414220 POLR3DP05423 398 aaPredicted RBP17.72■□□□□ 0.43
CHD1-202ENST00000414220 NUCB1Q02818 461 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 NOL9Q5SY16 702 aaKnown RBP17.72■□□□□ 0.43
CHD1-202ENST00000414220 SCYL3Q8IZE3 742 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 PI4K2BQ8TCG2 481 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
CHD1-202ENST00000414220 FSD1Q9BTV5 496 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 STAP2Q9UGK3 403 aa17.72■□□□□ 0.43
CHD1-202ENST00000414220 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
CHD1-202ENST00000414220 TRPA1O75762 1119 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 INPP5BP32019 993 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 PDE1AP54750 535 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 OTUD7AQ8TE49 926 aaPredicted RBP17.71■□□□□ 0.43
CHD1-202ENST00000414220 PRDM10Q9NQV6 1147 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 RNF186Q9NXI6 227 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 SNCAIPQ9Y6H5 919 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 THSD7BQ9C0I4 1608 aa17.71■□□□□ 0.43
CHD1-202ENST00000414220 MBD4O95243 580 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms