RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 PCDHA4Q9UN74 947 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 TACC3Q9Y6A5 838 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 SNCAIPQ9Y6H5 919 aa6.32□□□□□ -1.4
HMGB1P11-201ENST00000413899 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 IGHA1P01876 353 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 PROCP04070 461 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 DRD2P14416 443 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 RPL6Q02878 288 aaKnown RBP6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 C9orf131Q5VYM1 1079 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 DIEXFQ68CQ4 756 aaKnown RBP6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 FBXL19Q6PCT2 694 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 BNC2Q6ZN30 1099 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 FAM196AQ6ZSG2 479 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 CYFIP1Q7L576 1253 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 ARMC10Q8N2F6 343 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 GATAD2BQ8WXI9 593 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
HMGB1P11-201ENST00000413899 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 GFRA2O00451 464 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 SART1O43290 800 aaKnown RBP6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 F13A1P00488 732 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 FAM160A1Q05DH4 1040 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 LRFN4Q6PJG9 635 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 GOLM1Q8NBJ4 401 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 UTP4Q969X6 686 aaKnown RBP6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 FANCD2OSQ96PS1 177 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 AP4E1Q9UPM8 1137 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
HMGB1P11-201ENST00000413899 MSTNO14793 375 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 MPP2Q14168 576 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 INPP5AQ14642 412 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 DYMQ7RTS9 669 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 HDXQ7Z353 690 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 EZH1Q92800 747 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 PLPPR2Q96GM1 343 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 SPON2Q9BUD6 331 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 ACSS3Q9H6R3 686 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 FAM105AQ9NUU6 356 aa6.29□□□□□ -1.4
HMGB1P11-201ENST00000413899 FANCGO15287 622 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 DHX15O43143 795 aaKnown RBP6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 GAS2O43903 313 aaKnown RBP6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 ERCC5P28715 1186 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 NTF4P34130 210 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 ASPAP45381 313 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 WIPI1Q5MNZ9 446 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 FAM20CQ8IXL6 584 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 RNF214Q8ND24 703 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 TP53INP1Q96A56 240 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
HMGB1P11-201ENST00000413899 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 BPNT1O95861 308 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 H2AFB1P0C5Y9 115 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 H2AFB2P0C5Z0 115 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 BMP3P12645 472 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 CDK8P49336 464 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 USP11P51784 963 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 ZBTB37Q5TC79 503 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 GPAT2Q6NUI2 795 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 REC114Q7Z4M0 266 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 YIPF2Q9BWQ6 316 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 WNT10AQ9GZT5 417 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
HMGB1P11-201ENST00000413899 PRR36Q9H6K5 1346 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 NEFMP07197 916 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 MAP4P27816 1152 aaKnown RBP6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 CRKP46108 304 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 GJA8P48165 433 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 TTLL4Q14679 1199 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 CWF19L2Q2TBE0 894 aaKnown RBP6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 SGO2Q562F6 1265 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 NKAPLQ5M9Q1 402 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 CDPF1Q6NVV7 123 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 PRR23CQ6ZRP0 262 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 C12orf40Q86WS4 652 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 CLEC10AQ8IUN9 316 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 FBXO27Q8NI29 283 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 FAM83CQ9BQN1 747 aa6.26□□□□□ -1.41
HMGB1P11-201ENST00000413899 APOBRQ0VD83 1088 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 PAK2Q13177 524 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 PPM1JQ5JR12 505 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 SEZ6L2Q6UXD5 910 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 KCT2Q8NC54 265 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 RASGRP4Q8TDF6 673 aa6.25□□□□□ -1.41
HMGB1P11-201ENST00000413899 ACBD3Q9H3P7 528 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms