RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DHX8Q14562 1220 aaKnown RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 RRP36Q96EU6 259 aaKnown RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 ALG1Q9BT22 464 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 LTBP4Q8N2S1 1624 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 PARP1P09874 1014 aaKnown RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 CCDC173Q0VFZ6 552 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 OLFM4Q6UX06 510 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 HOMER1Q86YM7 354 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 MAP4K1Q92918 833 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 CCDC17Q96LX7 622 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 RAD17O75943 681 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 SEC24BO95487 1268 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 BMP15O95972 392 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 CHRNA5P30532 468 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 APOBRQ0VD83 1088 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 SULF1Q8IWU6 871 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 DCPSQ96C86 337 aaKnown RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 LZTS2Q9BRK4 669 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 DHX36Q9H2U1 1008 aaKnown RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 E7EWF7 191 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 FGAP02671 866 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 RAB3GAP1Q15042 981 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 WDR78Q5VTH9 848 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 CREBRFQ8IUR6 639 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 SEC62Q99442 399 aaKnown RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 ARID4AP29374 1257 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 RFX5P48382 616 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 TMEM266Q2M3C6 531 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 CHST3Q7LGC8 479 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 KRI1Q8N9T8 703 aaKnown RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 ZNF512BQ96KM6 892 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 FAM84BQ96KN1 310 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-211ENST00000413186 SWAP70Q9UH65 585 aa9.82□□□□□ -0.84
SYNE1-211ENST00000413186 B4DLN1 442 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 PRDM1O75626 825 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 KRT18P05783 430 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 MRPL12P52815 198 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 TGFB2P61812 414 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 TFAP4Q01664 338 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 RAB11FIP4Q86YS3 637 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 LLPHQ9BRT6 129 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 ECE2O60344 883 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 USP17L8P0C7I0 530 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 PI16Q6UXB8 463 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 PIH1D3Q9NQM4 214 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 TMOD4Q9NZQ9 345 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 GUCY1B3Q02153 619 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 MECOMQ03112 1051 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 GIMAP6Q6P9H5 292 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 SDR42E1Q8WUS8 393 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 CCDC39Q9UFE4 941 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 GNA11P29992 359 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 CAVIN1Q6NZI2 390 aaKnown RBP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 GLT8D2Q9H1C3 349 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 TSPY26PQ9H489 355 aa9.81□□□□□ -0.84
SYNE1-211ENST00000413186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.81□□□□□ -0.84
SYNE1-211ENST00000413186 A0A0G2JLW4 131 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 TPM1P09493 284 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 PHRF1Q9P1Y6 1649 aaKnown RBP9.8□□□□□ -0.84
SYNE1-211ENST00000413186 MRC1P22897 1456 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 PPP1R12BO60237 982 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-211ENST00000413186 PTH1RQ03431 593 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 SUPT20HL1Q3ZLR7 823 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 CSADQ9Y600 493 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 CLGNO14967 610 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 NAPAP54920 295 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
SYNE1-211ENST00000413186 LSG1Q9H089 658 aaKnown RBP9.8□□□□□ -0.84
SYNE1-211ENST00000413186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 PES1O00541 588 aaKnown RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 CYP2E1P05181 493 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 EAPPQ56P03 285 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 SNAP23O00161 211 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 HEATR3Q7Z4Q2 680 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 OSBP2Q969R2 916 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 TCP10L2B9ZVM9 353 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 AOC3Q16853 763 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 GPR101Q96P66 508 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 ZNRF3Q9ULT6 936 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 PTPDC1A2A3K4 754 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 POLRMTO00411 1230 aaKnown RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 DPEP1P16444 411 aa9.79□□□□□ -0.84
SYNE1-211ENST00000413186 TSR1Q2NL82 804 aaKnown RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 CERKLQ49MI3 558 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-211ENST00000413186 ZSCAN22P10073 491 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-211ENST00000413186 SLC1A4P43007 532 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms