RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 HLFQ16534 295 aa21.9■■□□□ 1.1
TNFRSF8-202ENST00000413146 SGMS1Q86VZ5 419 aa21.9■■□□□ 1.1
TNFRSF8-202ENST00000413146 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.9■■□□□ 1.1
TNFRSF8-202ENST00000413146 L2HGDHQ9H9P8 463 aa21.9■■□□□ 1.1
TNFRSF8-202ENST00000413146 IRS4O14654 1257 aaPredicted RBP21.89■■□□□ 1.1
TNFRSF8-202ENST00000413146 RANBP6O60518 1105 aaKnown RBP21.89■■□□□ 1.1
TNFRSF8-202ENST00000413146 CFAP100Q494V2 611 aa21.89■■□□□ 1.1
TNFRSF8-202ENST00000413146 MYL10Q9BUA6 226 aa21.89■■□□□ 1.1
TNFRSF8-202ENST00000413146 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.89■■□□□ 1.1
TNFRSF8-202ENST00000413146 HOMER1Q86YM7 354 aa21.89■■□□□ 1.09
TNFRSF8-202ENST00000413146 CNNM3Q8NE01 707 aa21.89■■□□□ 1.09
TNFRSF8-202ENST00000413146 STRBPQ96SI9 672 aaKnown RBP21.89■■□□□ 1.09
TNFRSF8-202ENST00000413146 STK36Q9NRP7 1315 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 EVA1CP58658 441 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 SSRP1Q08945 709 aaKnown RBP21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 FBXO38Q6PIJ6 1188 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 METTL16Q86W50 562 aaKnown RBP21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 SLC26A6Q9BXS9 759 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 KCNH3Q9ULD8 1083 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 SLC12A7Q9Y666 1083 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 TCRBV5S4A2TA0A5A2 114 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 MYO1BO43795 1136 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 ALX1Q15699 326 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 KRBA2Q6ZNG9 492 aa21.88■■□□□ 1.09
TNFRSF8-202ENST00000413146 IFIT3O14879 490 aaKnown RBP21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 KIF20AO95235 890 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 LIFRP42702 1097 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 PIGBQ92521 554 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 WASF1Q92558 559 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 DPF2Q92785 391 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 NAPBQ9H115 298 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 FAM217BQ9NTX9 383 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 LONRF3Q496Y0 759 aa21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 KRI1Q8N9T8 703 aaKnown RBP21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF8-202ENST00000413146 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 GABPB1Q06547 395 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 PUM3Q15397 648 aaKnown RBP21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 KRT222Q8N1A0 295 aa21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 HOOK1Q9UJC3 728 aaKnown RBP21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 LRP6O75581 1613 aa21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 ARAP2Q8WZ64 1704 aa21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
TNFRSF8-202ENST00000413146 PDE8AO60658 829 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 FMNL1O95466 1100 aaPredicted RBP21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 TOP1P11387 765 aaKnown RBP21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 VSTM4Q8IW00 320 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 CNNM2Q9H8M5 875 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 PATL2C9JE40 543 aaKnown RBP21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 SAFBQ15424 915 aaKnown RBP eCLIP21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 NOSTRINQ8IVI9 506 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 IFNL3Q8IZI9 196 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 LPIN2Q92539 896 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 INCENPQ9NQS7 918 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 ZSWIM5Q9P217 1185 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 PCDHA5Q9Y5H7 936 aa21.85■■□□□ 1.09
TNFRSF8-202ENST00000413146 MBD4O95243 580 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 ETF1P62495 437 aaKnown RBP21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 CTDSPL2Q05D32 466 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 CCDC93Q567U6 631 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 EPB41L4AQ9HCS5 686 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 FANCLQ9NW38 375 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 PHLPP2Q6ZVD8 1323 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 TIAM2Q8IVF5 1701 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 NPHP1O15259 732 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 MAP3K12Q12852 859 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 KRT23Q9C075 422 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 ITGB4P16144 1822 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 DOCK2Q92608 1830 aa21.84■■□□□ 1.09
TNFRSF8-202ENST00000413146 UBE2Q2LH0YL09 131 aa21.83■■□□□ 1.09
TNFRSF8-202ENST00000413146 MAGEB6Q8N7X4 407 aa21.83■■□□□ 1.09
TNFRSF8-202ENST00000413146 SPATA5Q8NB90 893 aa21.83■■□□□ 1.09
TNFRSF8-202ENST00000413146 NUP98P52948 1817 aa21.83■■□□□ 1.09
TNFRSF8-202ENST00000413146 MROH5Q6ZUA9 1318 aa21.83■■□□□ 1.09
TNFRSF8-202ENST00000413146 IFNAR1P17181 557 aa21.83■■□□□ 1.08
TNFRSF8-202ENST00000413146 ERCC6LQ2NKX8 1250 aa21.83■■□□□ 1.08
TNFRSF8-202ENST00000413146 TRIM22Q8IYM9 498 aa21.83■■□□□ 1.08
TNFRSF8-202ENST00000413146 TMX1Q9H3N1 280 aa21.83■■□□□ 1.08
TNFRSF8-202ENST00000413146 DNAI1Q9UI46 699 aa21.83■■□□□ 1.08
TNFRSF8-202ENST00000413146 IGSF3O75054 1194 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 MMP1P03956 469 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 AKNAD1Q5T1N1 836 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 FOXP4Q8IVH2 680 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 ELOA2Q8IYF1 753 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 HELBQ8NG08 1087 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 LRP5O75197 1615 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 TMEM232C9JQI7 657 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 SLC5A1P13866 664 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 MFSD6Q6ZSS7 791 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 FCHSD1Q86WN1 690 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 DIS3L2Q8IYB7 885 aaKnown RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 UTP14AQ9BVJ6 771 aaKnown RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 ARMT1Q9H993 441 aa21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF8-202ENST00000413146 NID2Q14112 1375 aa21.81■■□□□ 1.08
TNFRSF8-202ENST00000413146 BTBD18B2RXH4 712 aa21.81■■□□□ 1.08
TNFRSF8-202ENST00000413146 SART3Q15020 963 aaKnown RBP21.81■■□□□ 1.08
TNFRSF8-202ENST00000413146 SPECC1Q5M775 1068 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms