RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 TFIP11Q9UBB9 837 aaKnown RBP11.46□□□□□ -0.58
SMPD4-203ENST00000412570 RTL9Q8NET4 1388 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 CACNA1SQ13698 1873 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 GOLGA8HP0CJ92 632 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 KCNA3P22001 575 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 CCDC93Q567U6 631 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 RIOK1Q9BRS2 568 aaKnown RBP11.45□□□□□ -0.58
SMPD4-203ENST00000412570 DCP1AQ9NPI6 582 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-203ENST00000412570 BRPF3Q9ULD4 1205 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 N4BP2Q86UW6 1770 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-203ENST00000412570 FIBPO43427 364 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 BAG3O95817 575 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 EGFRP00533 1210 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
SMPD4-203ENST00000412570 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 DAGLAQ9Y4D2 1042 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 LARP1BQ659C4 914 aaKnown RBP11.45□□□□□ -0.58
SMPD4-203ENST00000412570 CTR9Q6PD62 1173 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 NIM1KQ8IY84 436 aa11.45□□□□□ -0.58
SMPD4-203ENST00000412570 H3BQV1 296 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 MCM5P33992 734 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 ANTXR2P58335 489 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-203ENST00000412570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMPD4-203ENST00000412570 ERICH2A1L162 156 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 CCDC69A6NI79 296 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 GPR162Q16538 588 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 COA1Q9GZY4 146 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 SPON1Q9HCB6 807 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 SCN7AQ01118 1682 aa11.44□□□□□ -0.58
SMPD4-203ENST00000412570 ASTN2O75129 1339 aaPredicted RBP11.44□□□□□ -0.58
SMPD4-203ENST00000412570 GDF11O95390 407 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 ANAPC15P60006 121 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 TFAP4Q01664 338 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 SCRN1Q12765 414 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 UIMC1Q96RL1 719 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 DDX4Q9NQI0 724 aaKnown RBP11.43□□□□□ -0.58
SMPD4-203ENST00000412570 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
SMPD4-203ENST00000412570 CRKP46108 304 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
SMPD4-203ENST00000412570 TTC14Q96N46 770 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 ST3GAL1Q11201 340 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 KRT32Q14532 448 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 SNX21Q969T3 373 aa11.43□□□□□ -0.58
SMPD4-203ENST00000412570 STYK1Q6J9G0 422 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 HOMER1Q86YM7 354 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 TEKT1Q969V4 418 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 MYH13Q9UKX3 1938 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 BCORQ6W2J9 1755 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 NBPF9Q3BBW0 867 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 AMOTL1Q8IY63 956 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
SMPD4-203ENST00000412570 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
SMPD4-203ENST00000412570 CENPFP49454 3210 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 TSPY3P0CV98 308 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 TSPY8P0CW00 308 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 GNL2Q13823 731 aaKnown RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 WTAPQ15007 396 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 LRRC47Q8N1G4 583 aaKnown RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 FTOQ9C0B1 505 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 LDHCP07864 332 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 SYT1P21579 422 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 CXCL9Q07325 125 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 ZNF512BQ96KM6 892 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 MROH7-TTC4A0A0A0MT08 1334 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 TNKSO95271 1327 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 KLRG2A4D1S0 409 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 CDC37L1Q7L3B6 337 aa11.41□□□□□ -0.58
SMPD4-203ENST00000412570 RTFDC1Q9BY42 306 aaPredicted RBP11.41□□□□□ -0.58
SMPD4-203ENST00000412570 PTPDC1A2A3K4 754 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 LAMB2P55268 1798 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 IL1R1P14778 569 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 PDIA3P30101 505 aaKnown RBP11.4□□□□□ -0.58
SMPD4-203ENST00000412570 PTGER2P43116 358 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 SPICE1Q8N0Z3 855 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 SLC16A10Q8TF71 515 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.58
SMPD4-203ENST00000412570 NFKBIEO00221 500 aa11.4□□□□□ -0.59
SMPD4-203ENST00000412570 IARSP41252 1262 aaKnown RBP11.4□□□□□ -0.59
SMPD4-203ENST00000412570 SNAP25P60880 206 aa11.4□□□□□ -0.59
SMPD4-203ENST00000412570 GSTO1P78417 241 aa11.4□□□□□ -0.59
SMPD4-203ENST00000412570 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.59
SMPD4-203ENST00000412570 IFIT1BQ5T764 474 aaKnown RBP11.4□□□□□ -0.59
SMPD4-203ENST00000412570 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
SMPD4-203ENST00000412570 CDC27P30260 824 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms