RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 LAMB1P07942 1786 aa19.72■□□□□ 0.75
DDR1-230ENST00000412274 MAP3K10Q02779 954 aa19.72■□□□□ 0.75
DDR1-230ENST00000412274 IFFO2Q5TF58 517 aa19.72■□□□□ 0.75
DDR1-230ENST00000412274 OPTNQ96CV9 577 aa19.72■□□□□ 0.75
DDR1-230ENST00000412274 ELP3Q9H9T3 547 aa19.72■□□□□ 0.75
DDR1-230ENST00000412274 ATRNL1Q5VV63 1379 aa19.71■□□□□ 0.75
DDR1-230ENST00000412274 TESPA1A2RU30 521 aaPredicted RBP19.71■□□□□ 0.75
DDR1-230ENST00000412274 SPDYE5A6NIY4 337 aa19.71■□□□□ 0.75
DDR1-230ENST00000412274 TBC1D12O60347 775 aa19.71■□□□□ 0.75
DDR1-230ENST00000412274 IDH1O75874 414 aaKnown RBP19.71■□□□□ 0.75
DDR1-230ENST00000412274 GTF2A2P52657 109 aa19.71■□□□□ 0.75
DDR1-230ENST00000412274 TEX11Q8IYF3 940 aa19.71■□□□□ 0.75
DDR1-230ENST00000412274 PIH1D3Q9NQM4 214 aaKnown RBP19.71■□□□□ 0.75
DDR1-230ENST00000412274 ATP5JP18859 108 aa19.7■□□□□ 0.74
DDR1-230ENST00000412274 PPATQ06203 517 aa19.7■□□□□ 0.74
DDR1-230ENST00000412274 MKRN3Q13064 507 aaKnown RBP19.7■□□□□ 0.74
DDR1-230ENST00000412274 PICALMQ13492 652 aa19.7■□□□□ 0.74
DDR1-230ENST00000412274 NOL9Q5SY16 702 aaKnown RBP19.7■□□□□ 0.74
DDR1-230ENST00000412274 MIGA2Q7L4E1 593 aa19.7■□□□□ 0.74
DDR1-230ENST00000412274 DHX36Q9H2U1 1008 aaKnown RBP19.7■□□□□ 0.74
DDR1-230ENST00000412274 AK9Q5TCS8 1911 aa19.7■□□□□ 0.74
DDR1-230ENST00000412274 CYP7A1P22680 504 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 IFNL1Q8IU54 200 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 GPATCH3Q96I76 525 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 OSBPL5Q9H0X9 879 aaPredicted RBP19.69■□□□□ 0.74
DDR1-230ENST00000412274 AATFQ9NY61 560 aaKnown RBP eCLIP19.69■□□□□ 0.74
DDR1-230ENST00000412274 TSKSQ9UJT2 592 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 SNCAIPQ9Y6H5 919 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 OTOFQ9HC10 1997 aa19.69■□□□□ 0.74
DDR1-230ENST00000412274 PPIL2Q13356 520 aa19.68■□□□□ 0.74
DDR1-230ENST00000412274 ZFPM1Q8IX07 1006 aa19.68■□□□□ 0.74
DDR1-230ENST00000412274 DDX4Q9NQI0 724 aaKnown RBP19.68■□□□□ 0.74
DDR1-230ENST00000412274 CETPP11597 493 aa19.67■□□□□ 0.74
DDR1-230ENST00000412274 MAGEB6Q8N7X4 407 aa19.67■□□□□ 0.74
DDR1-230ENST00000412274 ZKSCAN4Q969J2 545 aaPredicted RBP19.67■□□□□ 0.74
DDR1-230ENST00000412274 ZCCHC17Q9NP64 241 aaKnown RBP19.67■□□□□ 0.74
DDR1-230ENST00000412274 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.67■□□□□ 0.74
DDR1-230ENST00000412274 PI4KBQ9UBF8 816 aa19.67■□□□□ 0.74
DDR1-230ENST00000412274 HERC5Q9UII4 1024 aaKnown RBP19.67■□□□□ 0.74
DDR1-230ENST00000412274 DOCK2Q92608 1830 aa19.67■□□□□ 0.74
DDR1-230ENST00000412274 DDTLA6NHG4 134 aaPredicted RBP19.66■□□□□ 0.74
DDR1-230ENST00000412274 CTNND1O60716 968 aaKnown RBP19.66■□□□□ 0.74
DDR1-230ENST00000412274 GJA5P36382 358 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 SNAPC2Q13487 334 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 SH3BP5LQ7L8J4 393 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 SH3RF3Q8TEJ3 882 aaPredicted RBP19.66■□□□□ 0.74
DDR1-230ENST00000412274 OTUD5Q96G74 571 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 MS4A4AQ96JQ5 239 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 HAUS7Q99871 368 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.66■□□□□ 0.741e-8■■■■■ 50
DDR1-230ENST00000412274 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
DDR1-230ENST00000412274 PHF20L1A8MW92 1017 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 INPP5BP32019 993 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 SLC9C2Q5TAH2 1124 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
DDR1-230ENST00000412274 TBC1D2Q9BYX2 928 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 PICK1Q9NRD5 415 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 ECHDC1Q9NTX5 307 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 PAG1Q9NWQ8 432 aa19.65■□□□□ 0.74
DDR1-230ENST00000412274 ZBTB47Q9UFB7 747 aaPredicted RBP19.65■□□□□ 0.74
DDR1-230ENST00000412274 GOLIM4O00461 696 aa19.64■□□□□ 0.73
DDR1-230ENST00000412274 HDAC1Q13547 482 aaPredicted RBP19.64■□□□□ 0.73
DDR1-230ENST00000412274 ADGRA1Q86SQ6 560 aa19.64■□□□□ 0.73
DDR1-230ENST00000412274 FOXP4Q8IVH2 680 aaPredicted RBP19.64■□□□□ 0.73
DDR1-230ENST00000412274 SCYL3Q8IZE3 742 aa19.64■□□□□ 0.73
DDR1-230ENST00000412274 GCC1Q96CN9 775 aa19.64■□□□□ 0.73
DDR1-230ENST00000412274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.64■□□□□ 0.73
DDR1-230ENST00000412274 CCL15-CCL14A0A0B4J2E2 113 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 CXCL11O14625 94 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 CCL15Q16663 113 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 BOLA2Q9H3K6 86 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 NDUFB9Q9Y6M9 179 aa19.63■□□□□ 0.73
DDR1-230ENST00000412274 FLT1P17948 1338 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 GPR25O00155 361 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
DDR1-230ENST00000412274 IRF6O14896 467 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 PDE6AP16499 860 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 TRIM34Q9BYJ4 488 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 BCL11AQ9H165 835 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 GINM1Q9NU53 330 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 TAOK2Q9UL54 1235 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 KCNH4Q9UQ05 1017 aa19.62■□□□□ 0.73
DDR1-230ENST00000412274 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
DDR1-230ENST00000412274 TTC41PQ6P2S7 1318 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 MAGEB6P1A0A0J9YX57 407 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 ERC2O15083 957 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
DDR1-230ENST00000412274 FKTNO75072 461 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 USP5P45974 858 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 PKN2Q16513 984 aaKnown RBP19.61■□□□□ 0.73
DDR1-230ENST00000412274 LRRFIP1Q32MZ4 808 aaKnown RBP19.61■□□□□ 0.73
DDR1-230ENST00000412274 METTL16Q86W50 562 aaKnown RBP19.61■□□□□ 0.73
DDR1-230ENST00000412274 CNKSR2Q8WXI2 1034 aa19.61■□□□□ 0.73
DDR1-230ENST00000412274 BRI3BPQ8WY22 251 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms