RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 GATA6Q92908 595 aa8.51□□□□□ -1.05
HDAC9-205ENST00000411993 LRRC4CQ9HCJ2 640 aa8.51□□□□□ -1.05
HDAC9-205ENST00000411993 SEZ6L2Q6UXD5 910 aa8.5□□□□□ -1.05
HDAC9-205ENST00000411993 GRIN3AQ8TCU5 1115 aa8.5□□□□□ -1.05
HDAC9-205ENST00000411993 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
HDAC9-205ENST00000411993 PICK1Q9NRD5 415 aa8.5□□□□□ -1.05
HDAC9-205ENST00000411993 C1GALT1Q9NS00 363 aa8.5□□□□□ -1.05
HDAC9-205ENST00000411993 ANGEL1Q9UNK9 670 aaKnown RBP8.5□□□□□ -1.05
HDAC9-205ENST00000411993 TRIM37O94972 964 aa8.49□□□□□ -1.05
HDAC9-205ENST00000411993 WNT11O96014 354 aa8.49□□□□□ -1.05
HDAC9-205ENST00000411993 CELA3AP09093 270 aa8.49□□□□□ -1.05
HDAC9-205ENST00000411993 BMP6P22004 513 aa8.49□□□□□ -1.05
HDAC9-205ENST00000411993 GP2P55259 537 aaKnown RBP8.49□□□□□ -1.05
HDAC9-205ENST00000411993 CDK5R2Q13319 367 aa8.49□□□□□ -1.05
HDAC9-205ENST00000411993 ZC3H12AQ5D1E8 599 aaKnown RBP8.49□□□□□ -1.05
HDAC9-205ENST00000411993 DUSP9Q99956 384 aaKnown RBP8.49□□□□□ -1.05
HDAC9-205ENST00000411993 ERVK-24P63145 666 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 MSMPQ1L6U9 139 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 PCNX4Q63HM2 1172 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 PCOLCE2Q9UKZ9 415 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 CSADQ9Y600 493 aa8.48□□□□□ -1.05
HDAC9-205ENST00000411993 CYP27C1Q4G0S4 372 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 RNF214Q8ND24 703 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 ISL2Q96A47 359 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 PCDHA4Q9UN74 947 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
HDAC9-205ENST00000411993 ADAMTS4O75173 837 aa8.46□□□□□ -1.06
HDAC9-205ENST00000411993 NEFMP07197 916 aa8.46□□□□□ -1.06
HDAC9-205ENST00000411993 FAM87AP0C7U9 286 aa8.46□□□□□ -1.06
HDAC9-205ENST00000411993 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
HDAC9-205ENST00000411993 CACNA2D2Q9NY47 1150 aa8.46□□□□□ -1.06
HDAC9-205ENST00000411993 OAS3Q9Y6K5 1087 aaKnown RBP8.46□□□□□ -1.06
HDAC9-205ENST00000411993 AK5Q9Y6K8 562 aa8.46□□□□□ -1.06
HDAC9-205ENST00000411993 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-205ENST00000411993 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-205ENST00000411993 PPM1JQ5JR12 505 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 ELMO3Q96BJ8 720 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 RNF19AQ9NV58 838 aa8.45□□□□□ -1.06
HDAC9-205ENST00000411993 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-205ENST00000411993 LMNB1P20700 586 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 IRAK1P51617 712 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 PSMD2Q13200 908 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 SCARA3Q6AZY7 606 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 TTBK2Q6IQ55 1244 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 NPAS4Q8IUM7 802 aa8.44□□□□□ -1.06
HDAC9-205ENST00000411993 ZC3H7BQ9UGR2 993 aaKnown RBP8.44□□□□□ -1.06
HDAC9-205ENST00000411993 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-205ENST00000411993 DNAJC14Q6Y2X3 702 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-205ENST00000411993 C12orf40Q86WS4 652 aa8.43□□□□□ -1.06
HDAC9-205ENST00000411993 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
HDAC9-205ENST00000411993 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
HDAC9-205ENST00000411993 PRNPP04156 253 aa8.42□□□□□ -1.06
HDAC9-205ENST00000411993 CCDC27Q2M243 656 aa8.42□□□□□ -1.06
HDAC9-205ENST00000411993 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
HDAC9-205ENST00000411993 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
HDAC9-205ENST00000411993 GZF1Q9H116 711 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-205ENST00000411993 CDC37L1Q7L3B6 337 aa8.41□□□□□ -1.06
HDAC9-205ENST00000411993 FLCNQ8NFG4 579 aa8.41□□□□□ -1.06
HDAC9-205ENST00000411993 FBXL18Q96ME1 805 aa8.41□□□□□ -1.06
HDAC9-205ENST00000411993 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 PRAMEF27A3QJZ7 478 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 FANCGO15287 622 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 LEFTY1O75610 366 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 ZBTB37Q5TC79 503 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 HDXQ7Z353 690 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 TP53INP2Q8IXH6 220 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 DUSP23Q9BVJ7 150 aa8.4□□□□□ -1.06
HDAC9-205ENST00000411993 DAB2P98082 770 aa8.39□□□□□ -1.07
HDAC9-205ENST00000411993 LRFN4Q6PJG9 635 aa8.39□□□□□ -1.07
HDAC9-205ENST00000411993 KCT2Q8NC54 265 aa8.39□□□□□ -1.07
HDAC9-205ENST00000411993 GAL3ST3Q96A11 431 aa8.39□□□□□ -1.07
HDAC9-205ENST00000411993 RPS26P62854 115 aaKnown RBP8.38□□□□□ -1.07
HDAC9-205ENST00000411993 PTPN11Q06124 597 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-205ENST00000411993 RING1Q06587 406 aa8.38□□□□□ -1.07
HDAC9-205ENST00000411993 INPP5AQ14642 412 aa8.38□□□□□ -1.07
HDAC9-205ENST00000411993 MEI1Q5TIA1 1274 aa8.38□□□□□ -1.07
HDAC9-205ENST00000411993 PLPPR2Q96GM1 343 aa8.38□□□□□ -1.07
HDAC9-205ENST00000411993 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
HDAC9-205ENST00000411993 ERCC3P19447 782 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 NTF4P34130 210 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 LIG3P49916 1009 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 SEPT6Q14141 434 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 WIPI1Q5MNZ9 446 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-205ENST00000411993 UBE3DQ7Z6J8 389 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 FBXO33Q7Z6M2 555 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
HDAC9-205ENST00000411993 ZNF507Q8TCN5 953 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 NETO1Q8TDF5 533 aa8.37□□□□□ -1.07
HDAC9-205ENST00000411993 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms