RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
RN7SKP3-201ENST00000411409 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
RN7SKP3-201ENST00000411409 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
RN7SKP3-201ENST00000411409 ATP8A2Q9NTI2 1148 aa11.38□□□□□ -0.59
RN7SKP3-201ENST00000411409 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 MYH2Q9UKX2 1941 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 GSPT1P15170 499 aaKnown RBP11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 FKBP1BP68106 108 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
RN7SKP3-201ENST00000411409 EPB41L2O43491 1005 aaKnown RBP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 NF2P35240 595 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 NACAP1Q9BZK3 213 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 MYH7P12883 1935 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 ATRNL1Q5VV63 1379 aa11.36□□□□□ -0.59
RN7SKP3-201ENST00000411409 SHTN1A0MZ66 631 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 TBC1D12O60347 775 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 EGFRP00533 1210 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 TEX11Q8IYF3 940 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
RN7SKP3-201ENST00000411409 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 ITGBL1O95965 494 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 RGS3P49796 1198 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 ALX1Q15699 326 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 FOXP4Q8IVH2 680 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 OSBP2Q969R2 916 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 HERC5Q9UII4 1024 aaKnown RBP11.34□□□□□ -0.59
RN7SKP3-201ENST00000411409 GPAA1O43292 621 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 PPP1R12BO60237 982 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 CDC45O75419 566 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 MBD4O95243 580 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 HLA-DOAP06340 250 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 CHMLP26374 656 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 USP5P45974 858 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 RASA3Q14644 834 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 SBK1Q52WX2 424 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 DCAF15Q66K64 600 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 MIGA1Q8NAN2 632 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 SH3RF3Q8TEJ3 882 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 EHD4Q9H223 541 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 ZNF287Q9HBT7 754 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 ARPP21Q9UBL0 812 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
RN7SKP3-201ENST00000411409 CLRN2A0PK11 232 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 FLT1P17948 1338 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 PCNTO95613 3336 aa11.32□□□□□ -0.6
RN7SKP3-201ENST00000411409 CNTNAP1P78357 1384 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 AK9Q5TCS8 1911 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 SGSM2O43147 1006 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 SLC3A2P08195 630 aaKnown RBP11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 PYGBP11216 843 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 CWC27Q6UX04 472 aaKnown RBP11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
RN7SKP3-201ENST00000411409 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms