RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 CACNB3P54284 484 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 MAP4K1Q92918 833 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
LSM5-207ENST00000410044 GGA3Q9NZ52 723 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 PPP2R3BQ9Y5P8 575 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 MYH1P12882 1939 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 ZMYM6O95789 1325 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 FLT1P17948 1338 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 KIF3CO14782 793 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 PTH1RQ03431 593 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 SBK1Q52WX2 424 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
LSM5-207ENST00000410044 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 OSBPL5Q9H0X9 879 aaPredicted RBP18.2■□□□□ 0.5
LSM5-207ENST00000410044 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
LSM5-207ENST00000410044 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
LSM5-207ENST00000410044 ATRNL1Q5VV63 1379 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 REC8O95072 547 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 FGAP02671 866 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 RASA3Q14644 834 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 MAPKAPK5Q8IW41 473 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 ZFPM1Q8IX07 1006 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 DEFB129Q9H1M3 183 aa18.19■□□□□ 0.5
LSM5-207ENST00000410044 DHX36Q9H2U1 1008 aaKnown RBP18.19■□□□□ 0.5
LSM5-207ENST00000410044 BAZ2AQ9UIF9 1905 aaKnown RBP18.19■□□□□ 0.5
LSM5-207ENST00000410044 APPP05067 770 aa18.18■□□□□ 0.5
LSM5-207ENST00000410044 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
LSM5-207ENST00000410044 CDC37L1Q7L3B6 337 aa18.18■□□□□ 0.5
LSM5-207ENST00000410044 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
LSM5-207ENST00000410044 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
LSM5-207ENST00000410044 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
LSM5-207ENST00000410044 DDX60LQ5H9U9 1706 aaKnown RBP18.18■□□□□ 0.5
LSM5-207ENST00000410044 USP17L12C9JPN9 530 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 USP17L21D6R901 530 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 TCP10Q12799 353 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 PICALMQ13492 652 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 C12orf60Q5U649 245 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 SH3BP5LQ7L8J4 393 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 METTL16Q86W50 562 aaKnown RBP18.17■□□□□ 0.5
LSM5-207ENST00000410044 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 NAPBQ9H115 298 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 MCM9Q9NXL9 1143 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 ARPP21Q9UBL0 812 aaPredicted RBP18.17■□□□□ 0.5
LSM5-207ENST00000410044 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
LSM5-207ENST00000410044 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
LSM5-207ENST00000410044 DDTLA6NHG4 134 aaPredicted RBP18.16■□□□□ 0.5
LSM5-207ENST00000410044 CHADLQ6NUI6 762 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 KRT26Q7Z3Y9 468 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 FOXP4Q8IVH2 680 aaPredicted RBP18.16■□□□□ 0.5
LSM5-207ENST00000410044 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 ANAPC4Q9UJX5 808 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
LSM5-207ENST00000410044 TBC1D12O60347 775 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 SEC24BO95487 1268 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 TDO2P48775 406 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 TMEM39BQ9GZU3 492 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 EHD4Q9H223 541 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 PI4KBQ9UBF8 816 aa18.15■□□□□ 0.5
LSM5-207ENST00000410044 POLR3DP05423 398 aaPredicted RBP18.14■□□□□ 0.49
LSM5-207ENST00000410044 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
LSM5-207ENST00000410044 SAP30BPQ9UHR5 308 aaKnown RBP18.14■□□□□ 0.49
LSM5-207ENST00000410044 SCAF8Q9UPN6 1271 aaKnown RBP18.14■□□□□ 0.49
LSM5-207ENST00000410044 RBM8AQ9Y5S9 174 aaKnown RBP18.14■□□□□ 0.49
LSM5-207ENST00000410044 TOMM70O94826 608 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
LSM5-207ENST00000410044 PLCD1P51178 756 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 GABPAQ06546 454 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 SUPT20HL1Q3ZLR7 823 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 MAP1SQ66K74 1059 aaPredicted RBP18.13■□□□□ 0.49
LSM5-207ENST00000410044 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 KCNB2Q92953 911 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 GLIS2Q9BZE0 524 aaPredicted RBP18.13■□□□□ 0.49
LSM5-207ENST00000410044 SIPA1L1O43166 1804 aa18.13■□□□□ 0.49
LSM5-207ENST00000410044 ADM5C9JUS6 153 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 ZNF213O14771 459 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 HLA-DOAP06340 250 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 FGRP09769 529 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 PPARAQ07869 468 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 TSGA10IPQ3SY00 556 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 NBPF12Q5TAG4 269 aaPredicted RBP18.12■□□□□ 0.49
LSM5-207ENST00000410044 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
LSM5-207ENST00000410044 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
LSM5-207ENST00000410044 CSRNP1Q96S65 589 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 ROBO3Q96MS0 1386 aa18.12■□□□□ 0.49
LSM5-207ENST00000410044 MINDY4BA8MYZ0 360 aa18.11■□□□□ 0.49
LSM5-207ENST00000410044 CYP2D6P10635 497 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms