RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ECM29Q5VYK3 1845 aa24.7■■□□□ 1.55
C4orf48-202ENST00000409860 SGSM2O43147 1006 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 APPP05067 770 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 USP48Q86UV5 1035 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 FAM151AQ8WW52 585 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 ESYT1Q9BSJ8 1104 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 NACAP1Q9BZK3 213 aa24.7■■□□□ 1.54
C4orf48-202ENST00000409860 OSBPL5Q9H0X9 879 aaPredicted RBP24.7■■□□□ 1.54
C4orf48-202ENST00000409860 SCAF8Q9UPN6 1271 aaKnown RBP24.7■■□□□ 1.54
C4orf48-202ENST00000409860 CNTNAP1P78357 1384 aa24.69■■□□□ 1.54
C4orf48-202ENST00000409860 PATL2C9JE40 543 aaKnown RBP24.69■■□□□ 1.54
C4orf48-202ENST00000409860 ADM5C9JUS6 153 aa24.69■■□□□ 1.54
C4orf48-202ENST00000409860 TOMM70O94826 608 aa24.69■■□□□ 1.54
C4orf48-202ENST00000409860 SMC1BQ8NDV3 1235 aa24.69■■□□□ 1.54
C4orf48-202ENST00000409860 RBM46Q8TBY0 533 aaKnown RBP24.69■■□□□ 1.54
C4orf48-202ENST00000409860 GLIS2Q9BZE0 524 aaPredicted RBP24.69■■□□□ 1.54
C4orf48-202ENST00000409860 GIMAP6Q6P9H5 292 aa24.68■■□□□ 1.54
C4orf48-202ENST00000409860 TMEM39BQ9GZU3 492 aa24.68■■□□□ 1.54
C4orf48-202ENST00000409860 IL25Q9H293 177 aa24.68■■□□□ 1.54
C4orf48-202ENST00000409860 DCP1AQ9NPI6 582 aaPredicted RBP24.68■■□□□ 1.54
C4orf48-202ENST00000409860 GSG1L2A8MUP6 293 aa24.67■■□□□ 1.54
C4orf48-202ENST00000409860 ZSCAN29Q8IWY8 852 aaPredicted RBP24.67■■□□□ 1.54
C4orf48-202ENST00000409860 COL2A1P02458 1487 aaPredicted RBP24.66■■□□□ 1.54
C4orf48-202ENST00000409860 HSPD1P10809 573 aaKnown RBP24.66■■□□□ 1.54
C4orf48-202ENST00000409860 TDO2P48775 406 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 VPS53Q5VIR6 699 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 KIAA1211Q6ZU35 1233 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 ZFPM1Q8IX07 1006 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 AMOTL1Q8IY63 956 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 DHX36Q9H2U1 1008 aaKnown RBP24.66■■□□□ 1.54
C4orf48-202ENST00000409860 MCM9Q9NXL9 1143 aa24.66■■□□□ 1.54
C4orf48-202ENST00000409860 MKRN1Q9UHC7 482 aaKnown RBP24.66■■□□□ 1.54
C4orf48-202ENST00000409860 SAP30BPQ9UHR5 308 aaKnown RBP24.66■■□□□ 1.54
C4orf48-202ENST00000409860 IFNL3Q8IZI9 196 aa24.65■■□□□ 1.54
C4orf48-202ENST00000409860 NAPBQ9H115 298 aa24.65■■□□□ 1.54
C4orf48-202ENST00000409860 EPB41L4AQ9HCS5 686 aaPredicted RBP24.65■■□□□ 1.54
C4orf48-202ENST00000409860 ATRNL1Q5VV63 1379 aa24.65■■□□□ 1.54
C4orf48-202ENST00000409860 POLR3DP05423 398 aaPredicted RBP24.64■■□□□ 1.54
C4orf48-202ENST00000409860 HLA-DOAP06340 250 aa24.64■■□□□ 1.54
C4orf48-202ENST00000409860 CDCA5Q96FF9 252 aa24.64■■□□□ 1.54
C4orf48-202ENST00000409860 DSCC1Q9BVC3 393 aa24.64■■□□□ 1.54
C4orf48-202ENST00000409860 ARPP21Q9UBL0 812 aaPredicted RBP24.64■■□□□ 1.54
C4orf48-202ENST00000409860 FOXP2O15409 715 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 SUPT20HL1Q3ZLR7 823 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 TTC6Q86TZ1 520 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 HOOK2Q96ED9 719 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 TEPSINQ96N21 525 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 CSRNP1Q96S65 589 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 PALD1Q9ULE6 856 aa24.63■■□□□ 1.53
C4orf48-202ENST00000409860 DDTLA6NHG4 134 aaPredicted RBP24.62■■□□□ 1.53
C4orf48-202ENST00000409860 NF2P35240 595 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 FSTL1Q12841 308 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 ALX1Q15699 326 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 PRAMEF18Q5VWM3 479 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 SH3BP5LQ7L8J4 393 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 ANO2Q9NQ90 1003 aa24.62■■□□□ 1.53
C4orf48-202ENST00000409860 ZMYM6O95789 1325 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 USP17L12C9JPN9 530 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 USP17L21D6R901 530 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 TRAF5O00463 557 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 EIF5BO60841 1220 aaKnown RBP24.61■■□□□ 1.53
C4orf48-202ENST00000409860 NBPF12Q5TAG4 269 aaPredicted RBP24.61■■□□□ 1.53
C4orf48-202ENST00000409860 CDAN1Q8IWY9 1227 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 PI4KBQ9UBF8 816 aa24.61■■□□□ 1.53
C4orf48-202ENST00000409860 REC8O95072 547 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 ITGBL1O95965 494 aaPredicted RBP24.6■■□□□ 1.53
C4orf48-202ENST00000409860 SLC4A8Q2Y0W8 1093 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 SBK1Q52WX2 424 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 CTR9Q6PD62 1173 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 DLK2Q6UY11 383 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 CTNNA3Q9UI47 895 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 FOCADQ5VW36 1801 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 NAV1Q8NEY1 1877 aa24.6■■□□□ 1.53
C4orf48-202ENST00000409860 FGAP02671 866 aa24.59■■□□□ 1.53
C4orf48-202ENST00000409860 DCAF15Q66K64 600 aa24.59■■□□□ 1.53
C4orf48-202ENST00000409860 TRIM34Q9BYJ4 488 aa24.59■■□□□ 1.53
C4orf48-202ENST00000409860 LSG1Q9H089 658 aaKnown RBP24.59■■□□□ 1.53
C4orf48-202ENST00000409860 CDK5RAP2Q96SN8 1893 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 CYP2D6P10635 497 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 PTH1RQ03431 593 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 C12orf60Q5U649 245 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 EHD4Q9H223 541 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 ZNF408Q9H9D4 720 aa24.58■■□□□ 1.53
C4orf48-202ENST00000409860 U3KPZ7 1027 aaPredicted RBP24.58■■□□□ 1.53
C4orf48-202ENST00000409860 MINDY4BA8MYZ0 360 aa24.57■■□□□ 1.52
C4orf48-202ENST00000409860 FOXP4Q8IVH2 680 aaPredicted RBP24.57■■□□□ 1.52
C4orf48-202ENST00000409860 CRACR2BQ8N4Y2 399 aaPredicted RBP24.57■■□□□ 1.52
C4orf48-202ENST00000409860 DDX60LQ5H9U9 1706 aaKnown RBP24.57■■□□□ 1.52
C4orf48-202ENST00000409860 POLR2AP24928 1970 aaKnown RBP24.56■■□□□ 1.52
C4orf48-202ENST00000409860 CYP2D7A0A087X1C5 515 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 PLCD1P51178 756 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 C8orf34Q49A92 452 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 MAP4K1Q92918 833 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 HERC5Q9UII4 1024 aaKnown RBP24.56■■□□□ 1.52
C4orf48-202ENST00000409860 SERPINB13Q9UIV8 391 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 TAOK2Q9UL54 1235 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
C4orf48-202ENST00000409860 PPP1R12BO60237 982 aaPredicted RBP24.55■■□□□ 1.52
C4orf48-202ENST00000409860 CELF2O95319 508 aaKnown RBP24.55■■□□□ 1.52
C4orf48-202ENST00000409860 SLC3A2P08195 630 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms