RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SH2B2O14492 632 aaPredicted RBP6.51□□□□□ -1.37
EPHA4-202ENST00000409854 ZBTB7AO95365 584 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 BAG3O95817 575 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 NT5C2P49902 561 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 VPS33BQ9H267 617 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 RNF41Q9H4P4 317 aaPredicted RBP6.51□□□□□ -1.37
EPHA4-202ENST00000409854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.51□□□□□ -1.37
EPHA4-202ENST00000409854 B4E1Z4 1266 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 ECE2O60344 883 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 PLCG2P16885 1265 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 POLD1P28340 1107 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 RHBDL3P58872 404 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 APOBRQ0VD83 1088 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 SCRN1Q12765 414 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 DOK7Q18PE1 504 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 STRIP1Q5VSL9 837 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 MFSD6Q6ZSS7 791 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 RTKN2Q8IZC4 609 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 NECAB1Q8N987 351 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 SMARCC2Q8TAQ2 1214 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 SH3RF3Q8TEJ3 882 aaPredicted RBP6.51□□□□□ -1.37
EPHA4-202ENST00000409854 LLPHQ9BRT6 129 aaKnown RBP6.51□□□□□ -1.37
EPHA4-202ENST00000409854 MRIQ9BWK5 157 aa6.51□□□□□ -1.37
EPHA4-202ENST00000409854 C21orf2O43822 256 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 ORC4O43929 436 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 GJB2P29033 226 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 PDIA3P30101 505 aaKnown RBP6.5□□□□□ -1.37
EPHA4-202ENST00000409854 BTDP43251 543 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 R3HDM1Q15032 1099 aaKnown RBP6.5□□□□□ -1.37
EPHA4-202ENST00000409854 DACT2Q5SW24 774 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 SOGA3Q5TF21 947 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 SGMS1Q86VZ5 419 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 IGDCC4Q8TDY8 1250 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 ANGEL1Q9UNK9 670 aaKnown RBP6.5□□□□□ -1.37
EPHA4-202ENST00000409854 SMC3Q9UQE7 1217 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 DAGLAQ9Y4D2 1042 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 LIFRP42702 1097 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 PTGER2P43116 358 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 HHIPL2Q6UWX4 724 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 NOL10Q9BSC4 688 aaKnown RBP6.5□□□□□ -1.37
EPHA4-202ENST00000409854 DBNDD1Q9H9R9 158 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 LY9Q9HBG7 655 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 ZSWIM5Q9P217 1185 aa6.5□□□□□ -1.37
EPHA4-202ENST00000409854 SBF1O95248 1867 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L12C9JPN9 530 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L21D6R901 530 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 MCM4P33991 863 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 AOC3Q16853 763 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 CHMP4CQ96CF2 233 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 INCENPQ9NQS7 918 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 GPHNQ9NQX3 736 aaPredicted RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 BRPF3Q9ULD4 1205 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 HPS5Q9UPZ3 1129 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 ATF5Q9Y2D1 282 aaPredicted RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 CD2APQ9Y5K6 639 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 SMIM22K7EJ46 135 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 KDM4AO75164 1064 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 C12orf60Q5U649 245 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 PPP4R3CPQ6ZMV5 832 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 GBP4Q96PP9 640 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 PIM2Q9P1W9 311 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L3A6NCW0 530 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L4A6NCW7 530 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 YDJCA8MPS7 323 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 CTDNEP1O95476 244 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 SYT1P21579 422 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 RCAN1P53805 252 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 STK3Q13188 491 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 SEC23AQ15436 765 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L1Q7RTZ2 530 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 KCNQ5Q9NR82 932 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 ZNF219Q9P2Y4 722 aaPredicted RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 TTF2Q9UNY4 1162 aaKnown RBP6.49□□□□□ -1.37
EPHA4-202ENST00000409854 FLT1P17948 1338 aa6.49□□□□□ -1.37
EPHA4-202ENST00000409854 KLF18A0A0U1RQI7 1052 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 G3V3G9 751 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 STX6O43752 255 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 BAG4O95429 457 aaKnown RBP6.48□□□□□ -1.37
EPHA4-202ENST00000409854 DCAF8Q5TAQ9 597 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 ESR2Q92731 530 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 ZDHHC15Q96MV8 337 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 MXD3Q9BW11 206 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 COL2A1P02458 1487 aaPredicted RBP6.48□□□□□ -1.37
EPHA4-202ENST00000409854 MYH4Q9Y623 1939 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 DDX11L8A8MPP1 907 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 PPIP5K2O43314 1243 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 USP17L8P0C7I0 530 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 CYP2D6P10635 497 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 USP5P45974 858 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 EVX2Q03828 476 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 APOA5Q6Q788 366 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 TEX11Q8IYF3 940 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 RGS22Q8NE09 1264 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms