RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 MS4A4AQ96JQ5 239 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 HERC5Q9UII4 1024 aaKnown RBP15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 PNMA3Q9UL41 463 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 FZD1Q9UP38 647 aa15.73■□□□□ 0.11
SNORD88B-201ENST00000408454 TBC1D12O60347 775 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 MECOMQ03112 1051 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 POLA2Q14181 598 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 NAA16Q6N069 864 aaPredicted RBP15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 OTOP1Q7RTM1 612 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 BRI3BPQ8WY22 251 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 OSBPL5Q9H0X9 879 aaPredicted RBP15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 AS3MTQ9HBK9 375 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 HMG20BQ9P0W2 317 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 SLC45A1Q9Y2W3 748 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
SNORD88B-201ENST00000408454 IRF6O14896 467 aa15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 ADORA1P30542 326 aa15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 TTF1Q15361 905 aaPredicted RBP15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 MIGA2Q7L4E1 593 aa15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 RPAP2Q8IXW5 612 aaPredicted RBP15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 ZKSCAN4Q969J2 545 aaPredicted RBP15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 ATRNL1Q5VV63 1379 aa15.71■□□□□ 0.11
SNORD88B-201ENST00000408454 AOX1Q06278 1338 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 PNMA6EA0A0J9YXQ4 647 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 HLA-DOAP06340 250 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 PICALMQ13492 652 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 TAOK2Q9UL54 1235 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 PTPN22Q9Y2R2 807 aa15.7■□□□□ 0.1
SNORD88B-201ENST00000408454 OTOFQ9HC10 1997 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 ZBTB7BO15156 539 aaPredicted RBP15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 GJA5P36382 358 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 MAP3K12Q12852 859 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 TEX11Q8IYF3 940 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 CLASRPQ8N2M8 674 aaKnown RBP15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 CD99L2Q8TCZ2 262 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 NSUN4Q96CB9 384 aaKnown RBP15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 PI4KBQ9UBF8 816 aa15.69■□□□□ 0.1
SNORD88B-201ENST00000408454 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 NFIAQ12857 509 aa15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 CRACR2BQ8N4Y2 399 aaPredicted RBP15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 SMCR8Q8TEV9 937 aaPredicted RBP15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 GCC1Q96CN9 775 aa15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 PTPN18Q99952 460 aa15.68■□□□□ 0.1
SNORD88B-201ENST00000408454 AK9Q5TCS8 1911 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 BTBD19C9JJ37 291 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 PDHXO00330 501 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 INPP5BP32019 993 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 SOX10P56693 466 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 LACTBP83111 547 aaPredicted RBP15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 FOXP4Q8IVH2 680 aaPredicted RBP15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 NKX2-3Q8TAU0 364 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 ARMC5Q96C12 935 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 KIF1BPQ96EK5 621 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
SNORD88B-201ENST00000408454 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 RFX7Q2KHR2 1363 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 ASNSP08243 561 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 MCAMP43121 646 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 FCGRTP55899 365 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 PPP4CP60510 307 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 MYH2Q9UKX2 1941 aa15.66■□□□□ 0.1
SNORD88B-201ENST00000408454 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 PTPRAP18433 802 aa15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 UBXN2AP68543 259 aa15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 AMOTL1Q8IY63 956 aa15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 GTF3C2Q8WUA4 911 aaPredicted RBP15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 DDRGK1Q96HY6 314 aa15.65■□□□□ 0.1
SNORD88B-201ENST00000408454 MAST2Q6P0Q8 1798 aa15.64■□□□□ 0.1
SNORD88B-201ENST00000408454 A0A0G2JLL6 359 aaPredicted RBP15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 FMNL1O95466 1100 aaPredicted RBP15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 OSBPP22059 807 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 GCLCP48506 637 aaPredicted RBP15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 RHBDL3P58872 404 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 PRPF38BQ5VTL8 546 aaKnown RBP15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 CEP85Q6P2H3 762 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 GADL1Q6ZQY3 521 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 PRRT2Q7Z6L0 340 aaPredicted RBP15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 TTC6Q86TZ1 520 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 RAET1EQ8TD07 263 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 TRIM47Q96LD4 638 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 TMOD4Q9NZQ9 345 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 RCAN3Q9UKA8 241 aa15.64■□□□□ 0.09
SNORD88B-201ENST00000408454 USP17L5A8MUK1 530 aa15.63■□□□□ 0.09
SNORD88B-201ENST00000408454 IDH1O75874 414 aaKnown RBP15.63■□□□□ 0.09
SNORD88B-201ENST00000408454 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms