RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FPGT-TNNI3KV9GXZ4 949 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
SMARCB1-203ENST00000407082 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 WNT10BO00744 389 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 BRD1O95696 1058 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 PODNQ7Z5L7 613 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 ERO1AQ96HE7 468 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
SMARCB1-203ENST00000407082 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 INHBEP58166 350 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 CHMP4CQ96CF2 233 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 GRPEL1Q9HAV7 217 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 ZSWIM6Q9HCJ5 1215 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-203ENST00000407082 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 SLC5A1P13866 664 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 FGFR2P21802 821 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 TXNRD3Q86VQ6 643 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 LPIN2Q92539 896 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 TTC14Q96N46 770 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
SMARCB1-203ENST00000407082 CASTP20810 708 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 KLRK1P26718 216 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 TIMM10P62072 90 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 TSGA10IPQ3SY00 556 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 LDLRAD1Q5T700 205 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 C15orf52Q6ZUT6 534 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 SMC3Q9UQE7 1217 aa15.27■□□□□ 0.04
SMARCB1-203ENST00000407082 MED23Q9ULK4 1368 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 A0A1B0GUL7 405 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 IGF2BP3O00425 579 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 CREB3L3Q68CJ9 461 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 CLMNQ96JQ2 1002 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 NEUROD6Q96NK8 337 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 HAUS7Q99871 368 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 ZNF609O15014 1411 aa15.26■□□□□ 0.03
SMARCB1-203ENST00000407082 H0YGN5 161 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 PDCP20941 246 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 GYG1P46976 350 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 AK2P54819 239 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 ZNF445P59923 1031 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 CRHR2Q13324 411 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 CAVIN4Q5BKX8 364 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 BLOC1S2Q6QNY1 142 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 VPS37DQ86XT2 251 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 ARMC5Q96C12 935 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 WNK4Q96J92 1243 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 A0A1B0GUL6 1792 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 TRIOBPQ9H2D6 2365 aa15.25■□□□□ 0.03
SMARCB1-203ENST00000407082 CEP290O15078 2479 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 DLL1O00548 723 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 SP3Q02447 781 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 PTH1RQ03431 593 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 XAGE2Q96GT9 111 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 DEFB129Q9H1M3 183 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 BRPF3Q9ULD4 1205 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
SMARCB1-203ENST00000407082 MYO3BQ8WXR4 1341 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 PRPF40AO75400 957 aaKnown RBP15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 ADORA1P30542 326 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 BCAMP50895 628 aa15.23■□□□□ 0.03
SMARCB1-203ENST00000407082 SLC9C1Q4G0N8 1177 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms