RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 ITFG2Q969R8 447 aa10.19□□□□□ -0.78
PSEN1-205ENST00000406768 ATG3Q9NT62 314 aa10.19□□□□□ -0.78
PSEN1-205ENST00000406768 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 SMTNP53814 917 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 LONRF3Q496Y0 759 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 CYP26C1Q6V0L0 522 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 HOOK2Q96ED9 719 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 SLF1Q9BQI6 1058 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 SLC40A1Q9NP59 571 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 SH3BP1Q9Y3L3 701 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 VIRMAQ69YN4 1812 aaKnown RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 ATP10AO60312 1499 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 MYZAPP0CAP1 466 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 ATP1A3P13637 1013 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 LAMB3Q13751 1172 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 TAF11Q15544 211 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 RUFY4Q6ZNE9 571 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 PGBD1Q96JS3 809 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 SELENOOQ9BVL4 669 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 NSD2O96028 1365 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 PRDM15P57071 1507 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 LMTK2Q8IWU2 1503 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 MAP2K7O14733 419 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 CETN3O15182 167 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 APBA1Q02410 837 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 NNTQ13423 1086 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 DRP2Q13474 957 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 CCDC96Q2M329 555 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 IFT20Q8IY31 132 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 AIDAQ96BJ3 306 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 GBP5Q96PP8 586 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 BOLA2Q9H3K6 86 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 STK38LQ9Y2H1 464 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 RICTORQ6R327 1708 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 RPS6KB1P23443 525 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 RCSD1Q6JBY9 416 aa10.18□□□□□ -0.78
PSEN1-205ENST00000406768 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
PSEN1-205ENST00000406768 KIDINS220Q9ULH0 1771 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 TET3O43151 1660 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 VWDEQ8N2E2 1590 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 MSH6P52701 1360 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 CUL3Q13618 768 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 SELENOSQ9BQE4 189 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 PHF23Q9BUL5 403 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 MYO1AQ9UBC5 1043 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 ANAPC4Q9UJX5 808 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 FAM184BQ9ULE4 1060 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 KIF24Q5T7B8 1368 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 SPAG1Q07617 926 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 PAK2Q13177 524 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 RASIP1Q5U651 963 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 NCAPH2Q6IBW4 605 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 NAA16Q6N069 864 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 KANK3Q6NY19 840 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 TOGARAM2Q6ZUX3 1019 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 RSRC2Q7L4I2 434 aaKnown RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 PPP1R42Q7Z4L9 355 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 RNF10Q8N5U6 811 aaKnown RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 VCX3AQ9NNX9 186 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 AOX1Q06278 1338 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 VWA3AA6NCI4 1184 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 KRT24Q2M2I5 525 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 FAM167BQ9BTA0 163 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 A1CFQ9NQ94 594 aaKnown RBP10.17□□□□□ -0.78
PSEN1-205ENST00000406768 WWC3Q9ULE0 1092 aa10.17□□□□□ -0.78
PSEN1-205ENST00000406768 ZC3H13Q5T200 1668 aaKnown RBP10.16□□□□□ -0.78
PSEN1-205ENST00000406768 KLHL33A6NCF5 533 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 PFKFB2O60825 505 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 CDKL5O76039 1030 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 NR1D1P20393 614 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 DYNC1I2Q13409 638 aaKnown RBP10.16□□□□□ -0.78
PSEN1-205ENST00000406768 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 CYB5D1Q6P9G0 228 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
PSEN1-205ENST00000406768 ATP6V0A4Q9HBG4 840 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 HOMER3Q9NSC5 361 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 A2MP01023 1474 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 MYBL2P10244 700 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 DESP17661 470 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 STX17P56962 302 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 PLEKHO1Q53GL0 409 aaPredicted RBP10.16□□□□□ -0.78
PSEN1-205ENST00000406768 ALS2CLQ60I27 953 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 PPFIBP2Q8ND30 876 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 RCOR1Q9UKL0 485 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 MACROD2A1Z1Q3 448 aa10.16□□□□□ -0.78
PSEN1-205ENST00000406768 C21orf2O43822 256 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms