RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PODNQ7Z5L7 613 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 CERS5Q8N5B7 392 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 KBTBD3Q8NAB2 608 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 FAM212AQ96EL1 285 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 FAM227BQ96M60 508 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 SEC62Q99442 399 aaKnown RBP10.09□□□□□ -0.79
GPC3-203ENST00000406757 GMLQ99445 158 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 TNRC18O15417 2968 aaPredicted RBP10.09□□□□□ -0.79
GPC3-203ENST00000406757 USP17L3A6NCW0 530 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 USP17L4A6NCW7 530 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 RNF113AO15541 343 aaKnown RBP10.08□□□□□ -0.8
GPC3-203ENST00000406757 CDC45O75419 566 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 CHMLP26374 656 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 C8orf34Q49A92 452 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 MFSD14BQ5SR56 506 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 DACT2Q5SW24 774 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 SLC9C2Q5TAH2 1124 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 PRAMEF18Q5VWM3 479 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
GPC3-203ENST00000406757 CCDC129Q6ZRS4 1044 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 USP17L1Q7RTZ2 530 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 RASAL3Q86YV0 1011 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 MAGEB6Q8N7X4 407 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 WDR66Q8TBY9 1149 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 IL25Q9H293 177 aa10.08□□□□□ -0.8
GPC3-203ENST00000406757 FAM205AQ6ZU69 1335 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 MYH13Q9UKX3 1938 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 A0A0D9SFI3 127 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 PDE6AP16499 860 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 SOX10P56693 466 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 MECOMQ03112 1051 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 TTF1Q15361 905 aaPredicted RBP10.07□□□□□ -0.8
GPC3-203ENST00000406757 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 ADGRA1Q86SQ6 560 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 ZNF384Q8TF68 577 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 DIAPH3Q9NSV4 1193 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
GPC3-203ENST00000406757 AK9Q5TCS8 1911 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 UBE2Q2LH0YL09 131 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 M0R2C6 588 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 LDHBP07195 334 aaKnown RBP10.06□□□□□ -0.8
GPC3-203ENST00000406757 CYP7A1P22680 504 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 ADD2P35612 726 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 FKBP1BP68106 108 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 MAP3K12Q12852 859 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 STRIP1Q5VSL9 837 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 DZIP1Q86YF9 867 aaKnown RBP10.06□□□□□ -0.8
GPC3-203ENST00000406757 KIAA0825Q8IV33 1275 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 PUS7LQ9H0K6 701 aaKnown RBP10.06□□□□□ -0.8
GPC3-203ENST00000406757 PCDHAC2Q9Y5I4 1007 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
GPC3-203ENST00000406757 TCRBV5S4A2TA0A5A2 114 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 TBC1D8O95759 1140 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 DYNLL1P63167 89 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 TTLL12Q14166 644 aaPredicted RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 SPTY2D1Q68D10 685 aaPredicted RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 OGFOD1Q8N543 542 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 NSUN4Q96CB9 384 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 ESYT1Q9BSJ8 1104 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.8
GPC3-203ENST00000406757 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 TTF2Q9UNY4 1162 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 PSME4Q14997 1843 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
GPC3-203ENST00000406757 SALL1Q9NSC2 1324 aa10.05□□□□□ -0.8
GPC3-203ENST00000406757 WNT10BO00744 389 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
GPC3-203ENST00000406757 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 CTU1Q7Z7A3 348 aaKnown RBP10.04□□□□□ -0.8
GPC3-203ENST00000406757 ZNF589Q86UQ0 364 aaPredicted RBP10.04□□□□□ -0.8
GPC3-203ENST00000406757 ZGPATQ8N5A5 531 aaKnown RBP10.04□□□□□ -0.8
GPC3-203ENST00000406757 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 ARMT1Q9H993 441 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 MAST3O60307 1309 aa10.04□□□□□ -0.8
GPC3-203ENST00000406757 HIP1O00291 1037 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 PRKAB2O43741 272 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 MBD4O95243 580 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 RBM5P52756 815 aaKnown RBP eCLIP10.03□□□□□ -0.8
GPC3-203ENST00000406757 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
GPC3-203ENST00000406757 PRKG1Q13976 671 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 CASC1Q6TDU7 716 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 LCORLQ8N3X6 602 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 ZNF296Q8WUU4 475 aaPredicted RBP10.03□□□□□ -0.8
GPC3-203ENST00000406757 APPBP2Q92624 585 aa10.03□□□□□ -0.8
GPC3-203ENST00000406757 AATFQ9NY61 560 aaKnown RBP eCLIP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms