RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
FAM49A-202ENST00000406434 TNS4Q8IZW8 715 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 NSUN4Q96CB9 384 aaKnown RBP12.64□□□□□ -0.39
FAM49A-202ENST00000406434 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
FAM49A-202ENST00000406434 ELP3Q9H9T3 547 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 RNF186Q9NXI6 227 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
FAM49A-202ENST00000406434 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 GAKO14976 1311 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 RGS3P49796 1198 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
FAM49A-202ENST00000406434 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
FAM49A-202ENST00000406434 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
FAM49A-202ENST00000406434 SMARCA5O60264 1052 aaPredicted RBP12.62□□□□□ -0.39
FAM49A-202ENST00000406434 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
FAM49A-202ENST00000406434 DCAF15Q66K64 600 aa12.62□□□□□ -0.39
FAM49A-202ENST00000406434 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.62□□□□□ -0.39
FAM49A-202ENST00000406434 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
FAM49A-202ENST00000406434 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
FAM49A-202ENST00000406434 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
FAM49A-202ENST00000406434 CSADQ9Y600 493 aa12.62□□□□□ -0.39
FAM49A-202ENST00000406434 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
FAM49A-202ENST00000406434 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 TM4SF4P48230 202 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
FAM49A-202ENST00000406434 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 WRNIP1Q96S55 665 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 IDI2Q9BXS1 227 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 ZNF341Q9BYN7 854 aa12.61□□□□□ -0.39
FAM49A-202ENST00000406434 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 ENTPD3O75355 529 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 WDHD1O75717 1129 aaPredicted RBP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 BAG3O95817 575 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 CYP7A1P22680 504 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 GJA5P36382 358 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 VGLL4Q14135 290 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 SPRYD3Q8NCJ5 442 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 LRRCC1Q9C099 1032 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
FAM49A-202ENST00000406434 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
FAM49A-202ENST00000406434 ZBTB48P10074 688 aaPredicted RBP12.59□□□□□ -0.39
FAM49A-202ENST00000406434 INPP5BP32019 993 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 RHBDL3P58872 404 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
FAM49A-202ENST00000406434 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
FAM49A-202ENST00000406434 BOLA2Q9H3K6 86 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 SAGE1Q9NXZ1 904 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
FAM49A-202ENST00000406434 DDTLA6NHG4 134 aaPredicted RBP12.58□□□□□ -0.4
FAM49A-202ENST00000406434 INHBEP58166 350 aa12.58□□□□□ -0.4
FAM49A-202ENST00000406434 MAP3K12Q12852 859 aa12.58□□□□□ -0.4
FAM49A-202ENST00000406434 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
FAM49A-202ENST00000406434 TGFBRAP1Q8WUH2 860 aa12.58□□□□□ -0.4
FAM49A-202ENST00000406434 DCTPP1Q9H773 170 aa12.58□□□□□ -0.4
FAM49A-202ENST00000406434 RPAP1Q9BWH6 1393 aaPredicted RBP12.58□□□□□ -0.4
FAM49A-202ENST00000406434 GOLIM4O00461 696 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
FAM49A-202ENST00000406434 SLURP2P0DP57 97 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 PLCG2P16885 1265 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 DYNLL1P63167 89 aaKnown RBP12.57□□□□□ -0.4
FAM49A-202ENST00000406434 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
FAM49A-202ENST00000406434 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 MIGA1Q8NAN2 632 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
FAM49A-202ENST00000406434 PPP4CP60510 307 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 OTUD7BQ6GQQ9 843 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 MAPKAPK5Q8IW41 473 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
FAM49A-202ENST00000406434 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
FAM49A-202ENST00000406434 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 CCL15-CCL14A0A0B4J2E2 113 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 ATP5JP18859 108 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 GTF2A2P52657 109 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 CCL15Q16663 113 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
FAM49A-202ENST00000406434 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
FAM49A-202ENST00000406434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.56□□□□□ -0.4
FAM49A-202ENST00000406434 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
FAM49A-202ENST00000406434 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms