RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ATE1O95260 518 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 HSD3B2P26439 372 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 FXNQ16595 210 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 RASIP1Q5U651 963 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 GK5Q6ZS86 529 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 C19orf47Q8N9M1 422 aaKnown RBP6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 NEDD1Q8NHV4 660 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 GRIN3AQ8TCU5 1115 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 PPM1GO15355 546 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 IFRD2Q12894 506 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 POU4F3Q15319 338 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 HDXQ7Z353 690 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 WFDC8Q8IUA0 241 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 STK35Q8TDR2 534 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 NUDT8Q8WV74 236 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 CCDC113Q9H0I3 377 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 TMX1Q9H3N1 280 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 SLC12A7Q9Y666 1083 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 SNCAIPQ9Y6H5 919 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 IGF1RP08069 1367 aa6.91□□□□□ -1.3
HMGB3P18-201ENST00000406327 BCRP11274 1271 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 EPXP11678 715 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 BAG6P46379 1132 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 CASP7P55210 303 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 PDE4BQ07343 736 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 DDR2Q16832 855 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 JAZF1Q86VZ6 243 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 TM9SF2Q99805 663 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 CACNA2D2Q9NY47 1150 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 PCDHA4Q9UN74 947 aa6.9□□□□□ -1.3
HMGB3P18-201ENST00000406327 ENPP3O14638 875 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 FSCN2O14926 492 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 CLCQ05315 142 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 RASA3Q14644 834 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 TAF7LQ5H9L4 462 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 EGFLAMQ63HQ2 1017 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 LSRQ86X29 649 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
HMGB3P18-201ENST00000406327 PRR36Q9H6K5 1346 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 GRIK5Q16478 980 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 C20orf204Q6ZNR8 217 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 TAB3Q8N5C8 712 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 GPBAR1Q8TDU6 330 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 ELMO3Q96BJ8 720 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 PRDM6Q9NQX0 595 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 LRRC4BQ9NT99 713 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 MAPK8IP1Q9UQF2 711 aa6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 MRPL42Q9Y6G3 142 aaKnown RBP6.88□□□□□ -1.31
HMGB3P18-201ENST00000406327 LINC01387J3KSC0 135 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 MAOBP27338 520 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 CDC25BP30305 580 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 AFF1P51825 1210 aaKnown RBP6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 RASGRF1Q13972 1273 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 GMIPQ9P107 970 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 STARD13Q9Y3M8 1113 aa6.87□□□□□ -1.31
HMGB3P18-201ENST00000406327 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 M0R082 166 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 PDPK1O15530 556 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 GRIN3BO60391 1043 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 HTR3BO95264 441 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 ALBP02768 609 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 SLFN14P0C7P3 912 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 PPP2R5EQ16537 467 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 RNF187Q5TA31 235 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 LARP1BQ659C4 914 aaKnown RBP6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 NRSN2Q9GZP1 204 aa6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 SLKQ9H2G2 1235 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB3P18-201ENST00000406327 SYNGAP1Q96PV0 1343 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 GFRA2O00451 464 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 FURINP09958 794 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 KIF4BQ2VIQ3 1234 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 TXNDC11Q6PKC3 985 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 CHSY3Q70JA7 882 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 ALYREFQ86V81 257 aaKnown RBP6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 KRTAP1-3Q8IUG1 177 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 DTWD1Q8N5C7 304 aa6.85□□□□□ -1.31
HMGB3P18-201ENST00000406327 ZNF669Q96BR6 464 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms