RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 GRAPQ13588 217 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 BARGINQ6ZT62 677 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 TCHPQ9BT92 498 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZMYM4Q5VZL5 1548 aa13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-204ENST00000405493 CDK12Q9NYV4 1490 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 M0QZ92 97 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 USP14P54578 494 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 C2orf69Q8N8R5 385 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 LPXNO60711 386 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 CALRP27797 417 aaKnown RBP13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 CEP135Q66GS9 1140 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 CCDC102BQ68D86 513 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 KRT222Q8N1A0 295 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 KCNQ3O43525 872 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 TGFBRAP1Q8WUH2 860 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 GBP2P32456 591 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 CCDC40Q4G0X9 1142 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 KRT2P35908 639 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 TTC12Q9H892 705 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-204ENST00000405493 POLR3GO15318 223 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 CIAO1O76071 339 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 KRT13P13646 458 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 AZI2Q9H6S1 392 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 KCNG1Q9UIX4 513 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 TRIM75PA6NK02 468 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 EXOC1Q9NV70 894 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 GPAA1O43292 621 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 GTF2F1P35269 517 aaKnown RBP eCLIP13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 SYKP43405 635 aa13.31□□□□□ -0.28
RAPGEF3-204ENST00000405493 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 SMAP1Q8IYB5 467 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TIGD1Q96MW7 591 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TRERF1Q96PN7 1200 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 CRACR2AQ9BSW2 395 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TCERG1LQ5VWI1 586 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 NLRX1Q86UT6 975 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 PHACTR2O75167 634 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 AFMP43652 599 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 TERF1P54274 439 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 GPR108Q9NPR9 543 aa13.3□□□□□ -0.28
RAPGEF3-204ENST00000405493 UNC13BO14795 1591 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 SNW1Q13573 536 aaKnown RBP13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 PDE8BO95263 885 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 ATP5JP18859 108 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 KCNG4Q8TDN1 519 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 F13A1P00488 732 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 TAF12Q16514 161 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 CCDC186Q7Z3E2 898 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 NLRP10Q86W26 655 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 PLEKHM2Q8IWE5 1019 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
RAPGEF3-204ENST00000405493 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 CERKLQ49MI3 558 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 STAT6P42226 847 aa13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 DNM2P50570 870 aa13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 DNM1Q05193 864 aaKnown RBP13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
RAPGEF3-204ENST00000405493 FAM13AO94988 1023 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms