RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CERS3Q8IU89 383 aa20.72■□□□□ 0.91
PTCHD3P3-201ENST00000403073 ZSCAN29Q8IWY8 852 aaPredicted RBP20.72■□□□□ 0.91
PTCHD3P3-201ENST00000403073 SEC62Q99442 399 aaKnown RBP20.72■□□□□ 0.91
PTCHD3P3-201ENST00000403073 ABT1Q9ULW3 272 aaKnown RBP20.72■□□□□ 0.91
PTCHD3P3-201ENST00000403073 DDTLA6NHG4 134 aaPredicted RBP20.71■□□□□ 0.91
PTCHD3P3-201ENST00000403073 TTLL12Q14166 644 aaPredicted RBP20.71■□□□□ 0.91
PTCHD3P3-201ENST00000403073 AIDAQ96BJ3 306 aa20.71■□□□□ 0.91
PTCHD3P3-201ENST00000403073 OSBPL5Q9H0X9 879 aaPredicted RBP20.71■□□□□ 0.91
PTCHD3P3-201ENST00000403073 UBE2Q2LH0YL09 131 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 M0R2C6 588 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 PRKAB2O43741 272 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SDSP20132 328 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ZMYM1Q5SVZ6 1142 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 MIGA2Q7L4E1 593 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SAP30BPQ9UHR5 308 aaKnown RBP20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SSC5DA1L4H1 1573 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 FLT1P17948 1338 aa20.7■□□□□ 0.9
PTCHD3P3-201ENST00000403073 POLR2AP24928 1970 aaKnown RBP20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 USP2O75604 605 aaPredicted RBP20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SAPCD2Q86UD0 394 aa20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SDR42E1Q8WUS8 393 aa20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 CSRNP1Q96S65 589 aa20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 STRBPQ96SI9 672 aaKnown RBP20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ANGEL1Q9UNK9 670 aaKnown RBP20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ECM29Q5VYK3 1845 aa20.69■□□□□ 0.9
PTCHD3P3-201ENST00000403073 PPP1R12BO60237 982 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SLURP2P0DP57 97 aa20.68■□□□□ 0.9
PTCHD3P3-201ENST00000403073 HUNKP57058 714 aa20.68■□□□□ 0.9
PTCHD3P3-201ENST00000403073 FAM227BQ96M60 508 aa20.68■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SLC4A4Q9Y6R1 1079 aa20.68■□□□□ 0.9
PTCHD3P3-201ENST00000403073 FKBP1BP68106 108 aa20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 SLC4A8Q2Y0W8 1093 aa20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ARMC9Q7Z3E5 817 aa20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 PALD1Q9ULE6 856 aa20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
PTCHD3P3-201ENST00000403073 GPAA1O43292 621 aa20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 CCDC129Q6ZRS4 1044 aa20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 TICAM2Q86XR7 235 aa20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 HOOK2Q96ED9 719 aa20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 MKRN1Q9UHC7 482 aaKnown RBP20.66■□□□□ 0.9
PTCHD3P3-201ENST00000403073 ATRNL1Q5VV63 1379 aa20.65■□□□□ 0.9
PTCHD3P3-201ENST00000403073 A0A0D9SFI3 127 aa20.65■□□□□ 0.9
PTCHD3P3-201ENST00000403073 DEFB115Q30KQ5 88 aa20.65■□□□□ 0.9
PTCHD3P3-201ENST00000403073 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
PTCHD3P3-201ENST00000403073 DCP1AQ9NPI6 582 aaPredicted RBP20.65■□□□□ 0.9
PTCHD3P3-201ENST00000403073 IREB2P48200 963 aaKnown RBP20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 MAP3K11Q16584 847 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 MCMDC2Q4G0Z9 681 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 LDLRAD1Q5T700 205 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ATP8A2Q9NTI2 1148 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.89
PTCHD3P3-201ENST00000403073 RASSF10A6NK89 507 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 FAM196BA6NMK8 535 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 GSG1L2A8MUP6 293 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CWC27Q6UX04 472 aaKnown RBP20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PAXIP1Q6ZW49 1069 aaPredicted RBP20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 KLRG1Q96E93 195 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ZNF341Q9BYN7 854 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DIAPH3Q9NSV4 1193 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PI4KBQ9UBF8 816 aa20.63■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PATL2C9JE40 543 aaKnown RBP20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 HIP1O00291 1037 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 APPP05067 770 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 POLR3DP05423 398 aaPredicted RBP20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CYP2D6P10635 497 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 MAP3K10Q02779 954 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CYP4F22Q6NT55 531 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 RGMBQ6NW40 437 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 COL2A1P02458 1487 aaPredicted RBP20.62■□□□□ 0.89
PTCHD3P3-201ENST00000403073 GNAT2P19087 354 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PLCD1P51178 756 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ZNF157P51786 506 aaPredicted RBP20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 EVX2Q03828 476 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 GRM1Q13255 1194 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 TTC6Q86TZ1 520 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 FOXP4Q8IVH2 680 aaPredicted RBP20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DNAJC5GQ8N7S2 189 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 HHIPL1Q96JK4 782 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 WRNIP1Q96S55 665 aa20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CYP2D7A0A087X1C5 515 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 USP17L12C9JPN9 530 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 USP17L21D6R901 530 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 TBC1D12O60347 775 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 HLA-DOAP06340 250 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CHMLP26374 656 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 BMP2KLQ5H9B9 411 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 VPS53Q5VIR6 699 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ZNF589Q86UQ0 364 aaPredicted RBP20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ANKRD13AQ8IZ07 590 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms