RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC196A0A1B0GTZ2 297 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 GSDMDP57764 484 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 PIP4K2BP78356 416 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CCAR2Q8N163 923 aaKnown RBP8.85□□□□□ -0.99
HDAC9-201ENST00000401921 LCORLQ8N3X6 602 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 MRFAP1L1Q96HT8 127 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CABP5Q9NP86 173 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 CCDC87Q9NVE4 849 aa8.85□□□□□ -0.99
HDAC9-201ENST00000401921 TUBGCP6Q96RT7 1819 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 MROH5Q6ZUA9 1318 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 A0A1W2PQ27 194 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 A0A1W2PQ64 194 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 A0A1W2PQD8 194 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 CMA1P23946 247 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 IL6STP40189 918 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 AFMP43652 599 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 CRKLP46109 303 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 NLRP12P59046 1061 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 NAA30Q147X3 362 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 SLC39A14Q15043 492 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 ANKRD18AQ8IVF6 992 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 ENGASEQ8NFI3 743 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 CDC5LQ99459 802 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 RNF41Q9H4P4 317 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 KCNH3Q9ULD8 1083 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 C5P01031 1676 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 USP27XA6NNY8 438 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 WDHD1O75717 1129 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 TOP1P11387 765 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 FANCCQ00597 558 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 RBM43Q6ZSC3 357 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 SMIM5Q71RC9 77 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 DHX40Q8IX18 779 aaKnown RBP8.84□□□□□ -0.99
HDAC9-201ENST00000401921 JCADQ9P266 1359 aa8.84□□□□□ -0.99
HDAC9-201ENST00000401921 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
HDAC9-201ENST00000401921 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 ATP1A3P13637 1013 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 U2AF2P26368 475 aaKnown RBP eCLIP8.83□□□□□ -1
HDAC9-201ENST00000401921 CHRNDQ07001 517 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 NR5A1Q13285 461 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 ZNF827Q17R98 1081 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 IQCA1Q86XH1 822 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 SLC4A9Q96Q91 983 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 ZNF652Q9Y2D9 606 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 PAXBP1Q9Y5B6 917 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 GOLGA8FQ08AF8 430 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 GOLGA8DPQ0D2H9 430 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
HDAC9-201ENST00000401921 CPLX3Q8WVH0 158 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 ESR2Q92731 530 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 PLA2G12BQ9BX93 195 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 BRMS1Q9HCU9 246 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 SCN11AQ9UI33 1791 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 CYP2D7A0A087X1C5 515 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 LOC102724428A0A0B4J2F2 783 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 FOXP2O15409 715 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 CBFA2T2O43439 604 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 SIK1P57059 783 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 IFIT1BQ5T764 474 aaKnown RBP8.83□□□□□ -1
HDAC9-201ENST00000401921 SYT10Q6XYQ8 523 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 SMARCE1Q969G3 411 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 DHX58Q96C10 678 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 VPS54Q9P1Q0 977 aa8.83□□□□□ -1
HDAC9-201ENST00000401921 COL5A2P05997 1499 aaPredicted RBP8.82□□□□□ -1
HDAC9-201ENST00000401921 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
HDAC9-201ENST00000401921 GUCY1A2P33402 732 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 STX17P56962 302 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 MYL5Q02045 173 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 CATIPQ7Z7H3 387 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 TRMT44Q8IYL2 757 aaKnown RBP8.82□□□□□ -1
HDAC9-201ENST00000401921 MNS1Q8NEH6 495 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 PCDHA5Q9Y5H7 936 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
HDAC9-201ENST00000401921 BAZ2BQ9UIF8 2168 aaKnown RBP8.82□□□□□ -1
HDAC9-201ENST00000401921 KIF1AQ12756 1690 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 SALL1Q9NSC2 1324 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 LONRF3Q496Y0 759 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 NOSTRINQ8IVI9 506 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 STAMQ92783 540 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC9-201ENST00000401921 LY9Q9HBG7 655 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
HDAC9-201ENST00000401921 URI1O94763 535 aaPredicted RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 GNAT2P19087 354 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 DYNLL1P63167 89 aaKnown RBP8.81□□□□□ -1
HDAC9-201ENST00000401921 PPARAQ07869 468 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 CERS3Q8IU89 383 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 GRAMD1CQ8IYS0 662 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 TMTC2Q8N394 836 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 IGDCC4Q8TDY8 1250 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 FANCLQ9NW38 375 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 DNAI1Q9UI46 699 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 GSG1L2A8MUP6 293 aa8.81□□□□□ -1
HDAC9-201ENST00000401921 ERVV-1B6SEH8 477 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms