RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 CHRNDQ07001 517 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 LONRF3Q496Y0 759 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 SHC4Q6S5L8 630 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 DIS3L2Q8IYB7 885 aaKnown RBP12.8□□□□□ -0.36
SCFD2-202ENST00000401642 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
SCFD2-202ENST00000401642 ITPK1Q13572 414 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 UBE3CQ15386 1083 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCFD2-202ENST00000401642 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
SCFD2-202ENST00000401642 CDKL5O76039 1030 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 RTN1Q16799 776 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
SCFD2-202ENST00000401642 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 DPF2Q92785 391 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 AFMP43652 599 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 SIK1P57059 783 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCFD2-202ENST00000401642 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 USP49Q70CQ1 688 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
SCFD2-202ENST00000401642 PLA2G12BQ9BX93 195 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 CDK11BP21127 795 aaKnown RBP12.79□□□□□ -0.36
SCFD2-202ENST00000401642 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
SCFD2-202ENST00000401642 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
SCFD2-202ENST00000401642 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 POLR2DO15514 142 aaKnown RBP12.78□□□□□ -0.36
SCFD2-202ENST00000401642 YEATS4O95619 227 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 AKAP17AQ02040 695 aaKnown RBP12.78□□□□□ -0.36
SCFD2-202ENST00000401642 SLC39A14Q15043 492 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 NMT2O60551 498 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 KLRK1P26718 216 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 STX17P56962 302 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 SART3Q15020 963 aaKnown RBP12.78□□□□□ -0.36
SCFD2-202ENST00000401642 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCFD2-202ENST00000401642 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
SCFD2-202ENST00000401642 TMEM232C9JQI7 657 aa12.77□□□□□ -0.36
SCFD2-202ENST00000401642 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.36
SCFD2-202ENST00000401642 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.36
SCFD2-202ENST00000401642 TPM4P67936 248 aa12.77□□□□□ -0.36
SCFD2-202ENST00000401642 FANCLQ9NW38 375 aa12.77□□□□□ -0.36
SCFD2-202ENST00000401642 PCDHA5Q9Y5H7 936 aa12.77□□□□□ -0.36
SCFD2-202ENST00000401642 ADAMTS7Q9UKP4 1686 aa12.77□□□□□ -0.36
SCFD2-202ENST00000401642 CMA1P23946 247 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 UBASH3AP57075 661 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 FANCCQ00597 558 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
SCFD2-202ENST00000401642 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
SCFD2-202ENST00000401642 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 DCCP43146 1447 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 NBPF11Q86T75 865 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
SCFD2-202ENST00000401642 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
SCFD2-202ENST00000401642 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 NLRP12P59046 1061 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
SCFD2-202ENST00000401642 SMAP1Q8IYB5 467 aaPredicted RBP12.76□□□□□ -0.37
SCFD2-202ENST00000401642 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
SCFD2-202ENST00000401642 EVCP57679 992 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
SCFD2-202ENST00000401642 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
SCFD2-202ENST00000401642 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 DHX58Q96C10 678 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
SCFD2-202ENST00000401642 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 CCZ1BP86790 482 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 CCZ1P86791 482 aaPredicted RBP12.75□□□□□ -0.37
SCFD2-202ENST00000401642 PPARAQ07869 468 aa12.75□□□□□ -0.37
SCFD2-202ENST00000401642 NTRK3Q16288 839 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms