RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ERC1Q8IUD2 1116 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 RHPN1Q8TCX5 695 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 BRI3BPQ8WY22 251 aa19.45■□□□□ 0.7
ATG4B-203ENST00000400772 SLURP2P0DP57 97 aa19.44■□□□□ 0.7
ATG4B-203ENST00000400772 GTF2A2P52657 109 aa19.44■□□□□ 0.7
ATG4B-203ENST00000400772 MAP3K10Q02779 954 aa19.44■□□□□ 0.7
ATG4B-203ENST00000400772 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
ATG4B-203ENST00000400772 AK9Q5TCS8 1911 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 PHF20L1A8MW92 1017 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 IRF6O14896 467 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
ATG4B-203ENST00000400772 PICALMQ13492 652 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 AACSQ86V21 672 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 IL1RAPL2Q9NP60 686 aa19.43■□□□□ 0.7
ATG4B-203ENST00000400772 PIH1D3Q9NQM4 214 aaKnown RBP19.43■□□□□ 0.7
ATG4B-203ENST00000400772 CCL15-CCL14A0A0B4J2E2 113 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 CCDC85CA6NKD9 419 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 FKTNO75072 461 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 PPATQ06203 517 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 CRHR2Q13324 411 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 PPIL2Q13356 520 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 CCL15Q16663 113 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 NOL9Q5SY16 702 aaKnown RBP19.42■□□□□ 0.7
ATG4B-203ENST00000400772 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 ADGRA1Q86SQ6 560 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 NDUFB9Q9Y6M9 179 aa19.42■□□□□ 0.7
ATG4B-203ENST00000400772 MAP4K4O95819 1239 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-203ENST00000400772 NAA16Q6N069 864 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-203ENST00000400772 FAM43AQ8N2R8 423 aa19.41■□□□□ 0.7
ATG4B-203ENST00000400772 CHMP4BQ9H444 224 aaKnown RBP19.41■□□□□ 0.7
ATG4B-203ENST00000400772 HMMRO75330 724 aa19.4■□□□□ 0.7
ATG4B-203ENST00000400772 ZSCAN29Q8IWY8 852 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-203ENST00000400772 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-203ENST00000400772 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-203ENST00000400772 AATFQ9NY61 560 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATG4B-203ENST00000400772 MYO5AQ9Y4I1 1855 aaKnown RBP19.39■□□□□ 0.7
ATG4B-203ENST00000400772 APBB1O00213 710 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 IGSF3O75054 1194 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 PPP4CP60510 307 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 SNAPC2Q13487 334 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 ANTXR1Q9H6X2 564 aa19.39■□□□□ 0.69
ATG4B-203ENST00000400772 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
ATG4B-203ENST00000400772 TBC1D12O60347 775 aa19.38■□□□□ 0.69
ATG4B-203ENST00000400772 CETPP11597 493 aa19.38■□□□□ 0.69
ATG4B-203ENST00000400772 TEX11Q8IYF3 940 aa19.38■□□□□ 0.69
ATG4B-203ENST00000400772 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-203ENST00000400772 KCNH4Q9UQ05 1017 aa19.38■□□□□ 0.69
ATG4B-203ENST00000400772 DOCK2Q92608 1830 aa19.37■□□□□ 0.69
ATG4B-203ENST00000400772 RAB11FIP3O75154 756 aa19.37■□□□□ 0.69
ATG4B-203ENST00000400772 BAG3O95817 575 aa19.37■□□□□ 0.69
ATG4B-203ENST00000400772 MOGSQ13724 837 aa19.37■□□□□ 0.69
ATG4B-203ENST00000400772 PKN2Q16513 984 aaKnown RBP19.37■□□□□ 0.69
ATG4B-203ENST00000400772 CLASRPQ8N2M8 674 aaKnown RBP19.37■□□□□ 0.69
ATG4B-203ENST00000400772 PTPRAP18433 802 aa19.36■□□□□ 0.69
ATG4B-203ENST00000400772 CAP1Q01518 475 aa19.36■□□□□ 0.69
ATG4B-203ENST00000400772 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
ATG4B-203ENST00000400772 MAST2Q6P0Q8 1798 aa19.35■□□□□ 0.69
ATG4B-203ENST00000400772 IDH1O75874 414 aaKnown RBP19.35■□□□□ 0.69
ATG4B-203ENST00000400772 CYP7A1P22680 504 aa19.35■□□□□ 0.69
ATG4B-203ENST00000400772 DYNLL1P63167 89 aaKnown RBP19.35■□□□□ 0.69
ATG4B-203ENST00000400772 TAF1CQ15572 869 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-203ENST00000400772 TGFBRAP1Q8WUH2 860 aa19.35■□□□□ 0.69
ATG4B-203ENST00000400772 NOL10Q9BSC4 688 aaKnown RBP19.35■□□□□ 0.69
ATG4B-203ENST00000400772 ZFYVE28Q9HCC9 887 aa19.35■□□□□ 0.69
ATG4B-203ENST00000400772 HPS5Q9UPZ3 1129 aa19.35■□□□□ 0.69
ATG4B-203ENST00000400772 COL2A1P02458 1487 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-203ENST00000400772 FAM196BA6NMK8 535 aa19.34■□□□□ 0.69
ATG4B-203ENST00000400772 CTNND1O60716 968 aaKnown RBP19.34■□□□□ 0.69
ATG4B-203ENST00000400772 IFIT2P09913 472 aaKnown RBP19.34■□□□□ 0.69
ATG4B-203ENST00000400772 PLCG2P16885 1265 aa19.34■□□□□ 0.69
ATG4B-203ENST00000400772 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
ATG4B-203ENST00000400772 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATG4B-203ENST00000400772 ZCCHC17Q9NP64 241 aaKnown RBP19.34■□□□□ 0.69
ATG4B-203ENST00000400772 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-203ENST00000400772 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
ATG4B-203ENST00000400772 CXCL11O14625 94 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 RGS19P49795 217 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 SP3Q02447 781 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
ATG4B-203ENST00000400772 OTOP1Q7RTM1 612 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 MAPKAPK5Q8IW41 473 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG4B-203ENST00000400772 PICK1Q9NRD5 415 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 AFG3L2Q9Y4W6 797 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 TRIM17Q9Y577 477 aa19.33■□□□□ 0.68
ATG4B-203ENST00000400772 FLT1P17948 1338 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 GPAT2Q6NUI2 795 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 FBXO46Q6PJ61 603 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-203ENST00000400772 ANKRD23Q86SG2 305 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 ERO1AQ96HE7 468 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
ATG4B-203ENST00000400772 TLR2O60603 784 aa19.31■□□□□ 0.68
ATG4B-203ENST00000400772 MAP3K12Q12852 859 aa19.31■□□□□ 0.68
ATG4B-203ENST00000400772 CCDC84Q86UT8 332 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-203ENST00000400772 DHX36Q9H2U1 1008 aaKnown RBP19.31■□□□□ 0.68
ATG4B-203ENST00000400772 PI4KBQ9UBF8 816 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms